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Information for unigene UN18269
| FASTA Sequence |
| Unigene ID: UN18269 | Length: 1415 |
SSR | | TAAATTAAATTTTGGCTGTCTAGAAGACATATTGGGGGTGATTGGTTGTGGCAAAAAGTATCCACAAGAAAACAACGCTTGTGCAT
ACCTATATAACAAACCGTTAAGAATAATCATTCGACATGAAAACTCAATTCGTCAATGGGAGGAGGTCTCTGACTCTAAAGTTGGG
ATCGTTCTTTACGAATACGAAGCATCTCTAAGATTCTAACATTCATAATCTCCAAACTTTTGTCTTATCTCTCACATCTTGATCAG
GTGAATTCCCCTGTAAGCAGTTGAAAAATCTTTCCATAGCATTCAATCACAAGCCAATATGGTTTTCACAGAAGGCCAAGCGTCTT
CAGCTGCTGGACATGCTCAGACGGTAAAGCGGGTGGCGACCATTCAGATCCCATCATTTCCCCATCTACATCCTCAACCACATACT
CTTTTGTTAGCATTCTTTTAGCGAGAATGTGATAATGGCGCTGCCAAATACGTTGTCCAACCATGGTTGCAACCAGTACGCTGTAG
AGTATTCCTATAACCGTAAACAAACCAAGAACTACTAATGCCATAATGAAGAGCAATGGCAATCCGGCTTCCCCTGCACCTCCAAG
GCAACCACTACATTCACTAACTGCACTTGCACAACCTTCAGTACATGCTGTGCAATCTGCCCACATACAAATAGTTCCCGGTAGAT
GGCAGTCTGTGCATATCCCAGGCTGACAGCAACAGAGACACAATTCACGGCAAGGCTGAGCTAGGTCATTGCGAACTCTGCGGTCG
TAGCAAGTTATGAAGCATCCAGATAGACCCAGCAGAGCAAAGAATAGTAAAGCTCCAGACATGTAATAAAAGGTGCCCTGACTGTC
AAAACCCCAAATATGACGAAGCCATGACTGCTGGTAGCTATCTATGAAATAGACCATGTATGCCAACGCAGCAATCACAAGCTGAA
CAGCAAGAAAGATGGATAAGATGTCACGAGTAACAAAGAAGCGAAACTTCAAGGTCCTCCATTTCCTATCACCCGCACCGTGTACT
CGAAGATAATACGGTGCCTTGCAAGTTGTGCAGTGCGCAAACGTAAAACCTTCCTTGATAGCTCTCCAGTGATCCAAGCAATCACG
ATGTACATACTTTGATGTTCCTTTGCATTTGCAAGGCGCAATGAAATCTCTACCGTCAGATTCAAGGCAGATTCGACACTGAATTT
GTTCGCCATGTCCAGCTTCGAGATCGATCTCGGATGGATCCATCGCCGGCGTCGGTGGAACCAACGGCGACAATTCCACTTCCTCC
GCCATCAACCCCCTACACAGCTATACCCAGAGAGAGAGAGAGAGAGAGAGACTTTGGAGGAGCTTCGATGATCCGATTTCGTTTTT
TCTTTTTTTTTTGGTTAGGTACTACTCTTAAAGAAGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002878588 protein binding protein [Arabidopsis lyrata subsp. lyrata] | 1665 | 3e-183 |
| NP_179802 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1661 | 1e-182 |
| NP_001189574 RING/FYVE/PHD zinc finger-containing protein [Arabidopsis thaliana] | 1661 | 1e-182 |
| XP_002533927 protein binding protein, putative [Ricinus communis] | 1526 | 5e-167 |
| XP_002280917 PREDICTED: hypothetical protein [Vitis vinifera] | 1509 | 4e-165 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84K04 Putative uncharacterized protein At2g22120 | 1661 | 7e-183 |
| B9T6Q8 Protein binding protein, putative | 1526 | 3e-167 |
| B9H584 Predicted protein | 1491 | 4e-163 |
| Q2R1H8 Os11g0604600 protein | 1431 | 3e-156 |
| C5Y5Y5 Putative uncharacterized protein Sb05g023940 | 1425 | 2e-155 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G22120.1 protein binding / zinc ion binding | 1662 | 3e-185 |
| AT1G11020.1 zinc finger (C3HC4-type RING finger) family protein | 365 | 7e-035 |
| AT1G50440.1 zinc finger (C3HC4-type RING finger) family protein | 335 | 2e-031 |
| AT1G50440.2 zinc finger (C3HC4-type RING finger) family protein | 335 | 2e-031 |
| AT1G50440.3 zinc finger (C3HC4-type RING finger) family protein | 335 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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