Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18279

FASTA Sequence
Unigene ID: UN18279Length: 825 SSR 
GGGCCGGCAAAACCAGCGAGGAGAGAGAGAGAAGAGAGAGAATGGATAGCGAAACCCTAATTGAATCGGCGATAAGGGTTCTGAAC
ACAGCTGACCCGTACGAAAAAGCGCGGCTTGGTGATTCGATAGCCGTCAAATGGCTCCAAGGCTCTATCTCCGAGCCCTACGATCC
CACCGTCGATCTCCCCGTCATGGACAGGCCAGCTCGTCTCACCAACGTGAAACTGGTGTCTCCGAGTTTGATGCCGAAGCTGGGAA
AAGCTGGTAGCTTGCAGAGCAGGCAAGCGATTGTTCACAGTCTTGTTCATATTGAAAGCTGGGCAGTTGACTTATCATGGGATATA
ATTGCTCGTTTCGGCAAGCAAGAGAAGATGCCGAGAGAGTTCTTTACGGACTTTGTTCGTGTAGCTCAAGACGAAGGCCGTCACTT
CACGCTGCTTGCAGCTCGGCTTGAGGAAATTGGTTCTCGTTACGGTGCGTTCCCTGCCCACGACGGTCTTTGGGACTCTGCAACCG
CTACTTCTCAGGATCTCTTGGCTCGTTTGGCTATTGAGCATTGCGTTCACGAGGCTAGGGGGCTAGATGTATTGCCCACGACGATA
TCCAGGTTTAGGAATGGAGGGGATAACGAGACGGCAGATTTGCTGGAGAAAGTTGTGTACCCTGAAGAAATCACTCACTGTGCAGC
TGGAGTAAATGGTTCAAGTATCTATGTGCAGGTCCAAGAATCCTGAAGTACATCAGCAGCGTAGAAGCAGATGATATCAGTGAGAG
ATATCCACAGTTCATTCGTAGTAGAGAGCATTTCAGGGACGGTGAGCCGCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_196072 uncharacterized protein [Arabidopsis thaliana]10315e-110
XP_002873153 oxidoreductase/ transition metal ion binding protein [Arabidopsis lyrata subsp. lyrata]10154e-108
XP_002316417 predicted protein [Populus trichocarpa]9822e-104
XP_002262808 PREDICTED: hypothetical protein [Vitis vinifera]9795e-104
CBI40196 unnamed protein product [Vitis vinifera]9795e-104

Swiss-Prot top hits (Blast detail)Scoree value
P43935 Uncharacterized protein HI_00772427e-020

TrEMBL top hits (Blast detail)Scoree value
Q9LZ73 3-oxoacyl-[acyl-carrier-protein] synthase-like protein10313e-110
B9HUX7 Predicted protein9822e-104
C7J0Q7 Os03g0363350 protein8021e-083
Q10L10 Expressed protein8021e-083
A3AI73 Putative uncharacterized protein7975e-083

Arabidopsis top hits (Blast detail)Scoree value
AT5G04520.1 unknown protein10365e-113
AT1G06240.1 unknown protein3091e-028

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
121  33%
 
71  33%

Unigene MembersMember information