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Information for unigene UN18288

FASTA Sequence
Unigene ID: UN18288Length: 816 SSR 
GGACTGATCCTCCCTCTTTCCCATGGCCAAGCCATCCTCCTCTCCTCTTCCCAAATCCCAATAGAACAAAACTCTCCTCTCTCTCT
CTCTCTCTTCCAATCTTCTTCAGATTCGAAATGGCTGCAGCAATCGCTTCTCTCTCCTTTCCGGCGCTGGGCCAATCCGCAAAGAT
CTCCAATTCAACCACGCCTTCTCTTCCTCTCGCCTCCGTCTCCGCCATCTCCAGGAGGATTTCTCGTCACTCTCTGACTTCTTCTA
GAGCATCCACTTCCTCTTCGAAATTAATTATCCACTGCATGTCTAGTGTTACCGATGTGCCACCTGTATCGGAGACAAAGTCAAAC
TTCCTAAAAGCGTACAAGCGACCAATCCCCAGCATCTACAACACCGTCTTGCGGGAGCTCATCGTACAGCAGCATTTGATGAGGTA
TAAAAAGACTTACCGTTACGACCCTGTTTTCGCCCTCGGCTTCGTCACCGTCTACGATCAGCTCATGGATGGTTATCCCAGCGATC
AGGATCGCGATTCTATTTTTCAAGCCTACGTCCAAGCTTTGAATGAGGATCCTAACCAATACCGAACTGATGCGCAGAAGATGGAG
GAATGGGCGCGAAGTCAGACTTCTGCTTCACTAGTTGACTTCTCGTCTAAGAGGGAGAAGTTGAAGCGATTCTTAAGGACATTTCA
GAAAGAGCTGGCAGTAAGAGGGTTCAGTTACAGCAGTTCTTCGCTGTTGGTTTGTTCGCTTGCTTGAGCTTGCAGTGCTACTGATC
CCACCGTCCTTGACAGCTTTGTGCGTCCTAATATCACAGAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABV89647 chloroplast light-regulated protein [Brassica rapa]8381e-087
XP_002884230 hypothetical protein ARALYDRAFT_900469 [Arabidopsis lyrata subsp. lyrata]7474e-077
AAM64943 unknown [Arabidopsis thaliana]7223e-074
NP_565491 protein THYLAKOID FORMATION 1 [Arabidopsis thaliana]7223e-074
XP_002275686 PREDICTED: hypothetical protein [Vitis vinifera]6264e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKT0 Protein THYLAKOID FORMATION 1, chloroplastic7265e-076
Q7XAB8 Protein THYLAKOID FORMATION1, chloroplastic5609e-057
Q84PB7 Protein THYLAKOID FORMATION1, chloroplastic5303e-053
B0C3M8 Protein thf12562e-021
Q116P5 Protein thf12516e-021

TrEMBL top hits (Blast detail)Scoree value
A8IXS3 Chloroplast light-regulated protein8388e-088
B9I6H1 Predicted protein6192e-062
C6T9W9 Putative uncharacterized protein6121e-061
B9RW80 Protein THYLAKOID FORMATION1, chloroplast, putative6003e-060
B9INV3 Predicted protein5985e-060

Arabidopsis top hits (Blast detail)Scoree value
AT2G20890.1 PSB297265e-077

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information