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Information for unigene UN18305
| FASTA Sequence |
| Unigene ID: UN18305 | Length: 1408 |
SSR | | GCACGAGGCTTGTTGCTTATCCATTCTCCTCTCTCAATCTTCCATAAATCAATTCTCTAGAATTCAAGAACAGAACCTTTTGATTC
ATCTCTCTCTCTCGTGCTCATAATTCGTTAAAACTGTAAAACAAAAAAAGAAGAAGAGGGATTCAAAAAATGACAGGCTTCTCTGT
GTCTCTTATCATCTCAAACTTCTCAAACGTCGCCTCGTATCTGTCTCCGATCTTCGACACCATACCGTCCAAGGTTGTCCCGGCGC
AGATCGAGAAGGTTGTCTCTTTGGTCTCTCGCACCGGCAGAGACTTGCAGCGTTACGATAACTCTGGCTACCGTCAAGTCGTCGGA
TGTGTACCGTACCGATACAAAACACAACAAGTCAACGGAACAGAATCCAAAGAAATCGAAGTTCTTCTCATCAGCGCTCAAAAGGG
GAAAGGAATGTTATTCCCAAAAGGAGGTTGGGAGATTGATGAGTCAATGGAGGAAGCGGCTTTGAGAGAGACGATCGAAGAAGCTG
GCGTAACGGGAGAGCTAGAGGAGAAGCTAGGGAGATGGCAATACAAAAGCAAAAGACATAACATCATTCACCATGGATACATGTTT
GCTCTGCTCGTTGACCAAGAGTTCGAGCGATGGCCCGAAGCTGAGATGAGACAACGCAAATGGGTGGGTTTGGATGAAGCAAGAGA
GGTATGTCAGAATTGGTGGATGAGAGAAGCTCTTGAAGCATTCGTTGACCTCAAGTGAGAATTGATGGATCATTCGTTGACCTTTT
GGTTGATAAGCATTCAGCCATTGAATCCCATATTCGAGTTAGTCGTCCAAAATAATCTTCAACGGATGATCCTACTTGTTTGCAAT
TTGCGAGAGATGCACGGAGTTGTTGATAACGTGCACCACTTTTGAGAGCAAACCGTTTCTGAATATGATCCCACAAGTCTTTGGCA
TGTTCTTTATGAGAGATATTGGATCGTAGTTTAGTTTCAATTGTCTGCTTGATCCAGTTTACAAGGAGATGGTTGTTGGCTGTCCA
GTCTTCAAGATCAGGAGAGTCGTCCGCCGGTTTTGGTATTGTGCCGCTGATGAAGCCAAATTTCTTACGTGCGCTCAGAGCAATAC
GAAGATTTTGTGACCATTCATCATAGTTTCGTCCATTAAGCAAAGGTTGAGAGATAACCGCTCCAGGATTATCACTAGATGACAAG
TCGTAAGGAGTTATTGTGCGTCGAGCCTTCGTTGTGGTTGCTAGGGTTCCTGCCATTGTCGGTTGTTTCGAGATCGTAGGTTAAGT
TCGAGAGTCGGTCGTGCTTGATTCAAAAACTTTCGTTCGAAAAAACGATGTTGCTTAGAGTCGTGGCTCTGATACCATGAGAAGTT
CTGTAATCGGTAAATATATTTCTGTGTTATTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890268 hypothetical protein ARALYDRAFT_312784 [Arabidopsis lyrata subsp. lyrata] | 927 | 1e-097 |
| NP_173266 nudix hydrolase 4 [Arabidopsis thaliana] | 910 | 1e-095 |
| XP_002888932 predicted protein [Arabidopsis lyrata subsp. lyrata] | 713 | 9e-073 |
| NP_177495 nudix hydrolase 21 [Arabidopsis thaliana] | 685 | 2e-069 |
| AAG30977 unknown protein [Arabidopsis thaliana] | 642 | 1e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LE73 Nudix hydrolase 4 | 910 | 5e-097 |
| Q8VY81 Nudix hydrolase 21, chloroplastic | 685 | 6e-071 |
| Q9ZU95 Nudix hydrolase 17, mitochondrial | 485 | 1e-047 |
| Q9LQU5 Nudix hydrolase 18, mitochondrial | 479 | 5e-047 |
| Q93ZY7 Nudix hydrolase 12, mitochondrial | 360 | 3e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9IEF7 Predicted protein | 608 | 9e-061 |
| C6T3D6 Putative uncharacterized protein (Fragment) | 550 | 5e-054 |
| B7FMS1 Putative uncharacterized protein | 548 | 8e-054 |
| C6SWX9 Putative uncharacterized protein | 544 | 2e-053 |
| B7FGG3 Putative uncharacterized protein | 531 | 7e-052 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18300.1 atnudt4 (Arabidopsis thaliana Nudix hydrolase homolog 4); hydrolase | 910 | 5e-098 |
| AT1G73540.1 atnudt21 (Arabidopsis thaliana Nudix hydrolase homolog 21); hydrolase | 685 | 6e-072 |
| AT2G01670.1 atnudt17 (Arabidopsis thaliana Nudix hydrolase homolog 17); hydrolase | 485 | 9e-049 |
| AT1G14860.1 atnudt18 (Arabidopsis thaliana Nudix hydrolase homolog 18); hydrolase | 482 | 2e-048 |
| AT1G12880.1 atnudt12 (Arabidopsis thaliana Nudix hydrolase homolog 12); hydrolase | 360 | 3e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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