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Information for unigene UN18316
| FASTA Sequence |
| Unigene ID: UN18316 | Length: 863 |
| SNP | GCATTTCATTCAATCTCATAGGATCGGTTTTCGTTCCTATCACGAAGCCAGAGAAGCTTTCCATCAACGATCATCGCCATGACTGT
GCTCTCATCTGCAGATCGAGGTAATGGTGAGAAGAAGGTGAAGAGTTCGTATTTTGATTTGCCGTCTATGGAAATATCAGTAGCGT
TTCCTCAAGCAACCCCAGCCTCTAAGTTCCCACCCTGCACTTCAGACTATTATCATTTCGATGATCTATTGACTCCGGAGGAACAG
GCTGTTCGGAAGAGGGTGAGAGAGTTCATGGAGAAAGAAGTTGCTCCCATTATGACTCAGTACTGGGAGAAGGCAGAGTTTCCTTT
CCATATCATTCCAAAGTTTGGAGCTTTGGGTGTTGCTGGTGGCTCCATCAAGGGTTATGGCTGTCCTGGCCTCTCCATCACAGCGA
ACGCTATTGCAACTGCAGAAATATCTAGAGTTGATGCAAGCTGTGGGACTTTTAATTTGGTGCATACCTCTTTGGGCATGCTCACT
ATTGCACTTTGTGGATCAGAAGCACAGAAGCAGAAATATTTGCCTGATTTGGCTCAGATGAAAACTGTGACTTGTTGGGCCTTGAC
AGAACCTGACAATGGAAGCGATGCAAGTGCTCTAAAAACAACTGCCACAAAGGTTGAAGGAGGTTGGGTACTTGAGGGACAAAAGC
GTTGGATTGGAAACAGCACCTTTGCAGATCTTTTGGTCATCCTTGCTAGGAATACGACAACAAACCAAGTCAACGGATTCTTAGTC
CAGAAAGATGCGCCTGGCCTAACGGTTACTAAGATCCCGAATAAATAGTTTACGTATTGTTCAGATGGAGACATCTATACAGAATG
TCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002877827 acyl-CoA oxidase 4 [Arabidopsis lyrata subsp. lyrata] | 1133 | 8e-122 |
| NP_190752 acyl-coenzyme A oxidase 4 [Arabidopsis thaliana] | 1130 | 2e-121 |
| 2IX6 Chain A, Short Chain Specific Acyl-Coa Oxidase From Arabidopsis Thaliana, Acx4 | 1130 | 2e-121 |
| CBI22806 unnamed protein product [Vitis vinifera] | 1021 | 8e-109 |
| XP_002264086 PREDICTED: hypothetical protein [Vitis vinifera] | 1010 | 1e-107 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q96329 Acyl-coenzyme A oxidase 4, peroxisomal | 1130 | 8e-123 |
| Q20772 Probable glutaryl-CoA dehydrogenase, mitochondrial | 349 | 3e-032 |
| P45857 Acyl-CoA dehydrogenase | 334 | 2e-030 |
| Q92947 Glutaryl-CoA dehydrogenase, mitochondrial | 314 | 3e-028 |
| Q8HXX8 Glutaryl-CoA dehydrogenase, mitochondrial | 311 | 7e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9T1J4 Acyl-CoA dehydrogenase, putative | 988 | 4e-105 |
| A7Y7F6 Acyl-CoA oxidase | 987 | 5e-105 |
| B9IGB1 Predicted protein | 981 | 2e-104 |
| B9HCY1 Predicted protein | 968 | 8e-103 |
| Q6J513 Putative short-chain acyl-CoA oxidase | 959 | 8e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G51840.1 ACX4 (ACYL-COA OXIDASE 4); acyl-CoA oxidase/ oxidoreductase | 1130 | 7e-124 |
| AT3G45300.1 IVD (ISOVALERYL-COA-DEHYDROGENASE); ATP binding / isovaleryl-CoA dehydrogenase | 219 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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