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Information for unigene UN18330
| FASTA Sequence |
| Unigene ID: UN18330 | Length: 1736 |
| SNP | CTTCGCTTCGGTGAATGGGAGTATACTCTAAAACGGTTGCTGTGTCACTCATTGTCTCGTTCCTGCTGTTTCTCTCTGCCTCTGCT
GAGCGTAATGATGGAACTTTCAGGGTTGGCCTGAAGAAACTTAAGTTGGATCCTAAGAGCCGTCTTGCAGCACGTGTTGGTTCCAA
GCAATTAAAGCCCTTGAGAGCTTACGGTCTTGGAGGTTCTGGGGATGCTGATATTGTCACGCTGAAGAATTACTTAGATGCTCAGT
ACTACGGTGAGATCGCTATTGGTACTCCGCCACAGAAGTTCACCGTGGTTTTTGACACTGGGAGCTCTAACCTCTGGGTGCCATCT
TCAAAATGCTATTTCTCGATTGCATGTCTCTTCCATTCCAAATACAAGTCCTCGCGTTCAAGCACATATGAGAAGAATGGAAAATC
CGCCGCAATTCACTACGGAACTGGGGCAATTGCTGGCTTCTTTAGTAATGATGCCGTCACGGTTGGCGATTTAGTTGTCAAGGATC
AGGAGTTTATTGAGGCAACCAAGGAGCCTGGTATAACATTTGTTGTAGCTAAATTTGATGGTATCCTTGGTCTTGGATTCCAAGAG
ATCTCAGTTGGAAATGCCGCTCCTGTTTGGTACAACATGCTCAAGCAAGGCCTCATCAAGGAGCCGGTGTTTTCATTTTGGCTTAA
CCGTAACGCTGAGGATGAAGAAGGTGGTGAACTTGTATTTGGAGGTGTTGATCCAAATCATTTCAAGGGAGAGCATACTTATGTCC
CTGTGACACAAAAGGGTTACTGGCAGTTTGACATGGGTGATGTTCTCATTGGCGGTGCACCCACTGGATACTGCGAAAGTGGCTGT
TCTGCGATAGCAGATTCTGGAACATCTTTGCTTGCTGGTCCAACAACTGTAATCACCATGATAAACCATGCTATTGGAGCAGCTGG
AGTTGTTAGCCAGCAATGCAAGATTGTTGTGGATCAGTACGGACAAACCATTTTGGATCTTCTTTTGTCTGAGACCCAACCGAAGA
AAATATGCTCCCAAATTGGTCTGTGCACTTTCGATGGTAAACGTGGTGTCAGTATGGGCATTGAGTCAGTGGTGGACAAGGAAAAC
GCCAAATCGTCCAATGGTGTTGGAGATGCCGCGTGTTCTGCATGTGAGATGGCAGTTGTTTGGATACAGAGCCAGCTGAGGCAGAA
CATGACTCAGGAACGCATATTGGACTACATCAACGATCTATGCGAGCGTCTTCCCAGCCCAATGGGAGAATCTGCAGTGGACTGTG
CACAACTCTCGACCATGCCCACTGTTTCGCTCACCATTGGAGGCAAAGTCTTTGATCTTGCTCCAGAGGAGTATGTTCTGAAGGTT
GGTGAGGGCCCTGTGGCACAGTGCATCAGTGGCTTTATTGCACTTGACGTTGCTCCACCTCGTGGACCTCTCTGGATCCTTGGAGA
TGTGTTCATGGGCAAATACCACACCGTGTTTGACTTTGGAAAAGAGCAGGTCGGGTTTGCAGAGGCAGTGTAGAACACGACGAGTA
TGGTTCTAGTTTGGTTTATGTAAAACAATCGGTCTCTCCAAGTGTTGGTATGTTTGTGTTAAAGACTTGTCCTAGTAGTTGTAATG
TTAAGGCCTTTGTAGTTTTGAAGATATTAGCTTTGTATATACCTATCGTTAAGTAAGTTCGATGTTGAAAGACTAAAAATAAAAGT
CCCTATGCCTTCGTGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAB03108 aspartic protease [Brassica napus] | 2587 | 6e-290 |
| BAJ34217 unnamed protein product [Thellungiella halophila] | 2500 | 7e-280 |
| NP_172655 aspartic proteinase A1 [Arabidopsis thaliana] | 2483 | 6e-278 |
| XP_002892661 aspartyl protease family protein [Arabidopsis lyrata subsp. lyrata] | 2472 | 1e-276 |
| AAC49730 aspartic proteinase [Arabidopsis thaliana] | 2409 | 2e-269 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04057 Aspartic proteinase | 2022 | 8e-226 |
| Q42456 Aspartic proteinase oryzasin-1 | 1903 | 5e-212 |
| P42210 Phytepsin | 1878 | 4e-209 |
| P40782 Cyprosin (Fragment) | 1819 | 3e-202 |
| P42211 Aspartic proteinase | 1621 | 2e-179 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q39311 Aspartic protease | 2587 | 4e-290 |
| O65390 At1g11910/F12F1_24 | 2483 | 4e-278 |
| Q38934 Aspartic proteinase (Fragment) | 2409 | 2e-269 |
| Q8VYL3 AT1G62290 protein | 2205 | 7e-246 |
| B9RXH6 Aspartic proteinase, putative | 2039 | 1e-226 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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