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Information for unigene UN18349

FASTA Sequence
Unigene ID: UN18349Length: 520 SSRSNP
GGGACAATAGAGGCCTAATTATTCAAAGAACTGTTTTTAACCACATTACTTCAATGATAAAACAAGGTTGGTTCACAGAGCAATGC
TCAGTCAGACACAAGTCACATAAACAAAGAAGGATCCCCATACAGATTTTTATTGAAAAAAACAGTCATATATATATGAGATGCTC
CGCTTCTCCTTAGGCCTTGGCGGTTTCAGCCTCCGAGTCCCAGAAAGCCGATTTCTTTCCAGTTTTTGAAACAGTCTGCAAAACAG
CGTCTGGCTGCACATTGCCTTTCACTGTCACCTTTTGCTCCTTTATATCCACATCAAACGACTCGACGCCTTCCATTTTGCCGAGG
ACTCTTTTCACAGCTCCAACACATCCCTCGCATGACATAGCCACTCTGAGAACAACGGTCTGAGACATAGCTTCGATCTCTCACAG
AAACTTTTAACCCACACAGTGAAAGCTTATACGAGAGAGAGAGAGATTGAAGTGATAAAGTTGATCCGAGTTATGTTTTTGAAAGG
ATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564870 homolog of anti-oxidant 1 [Arabidopsis thaliana]3672e-033
XP_002888491 hypothetical protein ARALYDRAFT_475728 [Arabidopsis lyrata subsp. lyrata]3554e-032
AAT12488 copper chaperone [Populus alba x Populus tremula var. glandulosa]3341e-029
BAJ92563 predicted protein [Hordeum vulgare subsp. vulgare]3341e-029
BAJ88616 predicted protein [Hordeum vulgare subsp. vulgare]3341e-029

Swiss-Prot top hits (Blast detail)Scoree value
Q9TT99 Copper transport protein ATOX11331e-007
Q3T0E0 Copper transport protein ATOX11303e-007
Q9XT28 Copper transport protein ATOX11303e-007
O08997 Copper transport protein ATOX11276e-007
Q9WUC4 Copper transport protein ATOX11213e-006

TrEMBL top hits (Blast detail)Scoree value
Q94BT9 At1g66240/T6J19_63671e-033
A9PCL8 Putative uncharacterized protein3348e-030
A9PIL5 Putative uncharacterized protein3348e-030
Q6J338 Copper chaperone3348e-030
A2YSB2 Putative uncharacterized protein3267e-029

Arabidopsis top hits (Blast detail)Scoree value
AT1G66240.1 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3687e-036
AT1G66240.2 ATX1 (ARABIDOPSIS HOMOLOG OF ANTI-OXIDANT 1); metal ion binding3168e-030
AT3G56240.1 CCH (COPPER CHAPERONE); copper chaperone3095e-029
AT5G27690.1 heavy-metal-associated domain-containing protein1742e-013
AT5G17450.1 heavy-metal-associated domain-containing protein / copper chaperone (CCH)-related1681e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  56%
 
112  22%
 
122  22%

Unigene MembersMember information