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Information for unigene UN18354

FASTA Sequence
Unigene ID: UN18354Length: 1407 SSR 
GTGAAAATTTAAATCACTCTTCCTACTAAACTTAAATTTAATAGATTGGAGTCAGTTGATAACCAAAAAAAATATATGAAATCAGT
TTGCAAACTAATAAAACAGATGAAGGTTGCAGCCATGGGGGGTTTCTCTAATTCAGCCTATTACTTGGCTTTGCTGTTATTGAGAT
CCTCGTCAACATCCATGGCGTTACTGTTAATGTCGATGCCAACATCCACACTCTTCTTGTCGTTGTTGTTCTTGTCTGAGTTACTA
TCGCAATTCTCGAGGATGACATTGCAGCTGTTGATGGTGGCCGAGTCTACAAGTCCAATGTTCCATAGTTTTATCATAAATAATCT
CCAGCACCAGCAGAGTGGTGAAGAATGGAGCAACTCTTCCTTGTGAAACTTCGAAAATGCTTCACATGCCCATGGTATATGACCAT
CCGCCACAACCCTTTGTTTTCTTACAAAAGAGTTCCAAAGATGCATGAATCTCTTTTCGTTCTTATTCACATCCACAAAATCATCA
AGCATCTGGCGATCTTCCAGATCTGCAACGTCATCATCCACTTCATCTTCGCTATCTCGATCAGACATTACTTGCTCAAGTGACAT
TGGCTGAACTCTGTGAGAATGATAGAACTGGCGTTTCTGGAGAAGTAGGTTGCTTCTAGCCTCTGATCGCTCGGCAGATAACTTTC
TTGTCTTAGCAGCATGGGCCACAGCTTCGCTTGTTAACACAGCTTTGGCATTCGAGTTCATCGAACATTGAGCTATGGCTGGTGAA
TTGTTCATCCCGAATTGTCCAGCAACATCTGTTGCCACGGGGTATCCTAGACTATGGTTTCCATTACTCAGCAGAGGGGTTGCATT
ATCTGTGCCATTGGGTAAACTGGGCGAATCCATGGGTAAAAAGGTAACATTTAGTAGGCTGGGGTTAACTCTATGACCTCTTTGTC
TACGCTTACGTGGTTTCGAATTTTGTAGCTCAAGCATCTAGGAAGAAACGATGGGTTGAAAAGAGAGCGAATGCGAAGAATGTTGT
AGAGACGAACAGGTTTACAATAGATCAATAGATTCTCATCAGGTGGTGAAATCACCTCCTCCTCTTGTGACGATTTCGCGCAACAA
TTCTGCCTACACATTCTCTCTCTCACTCTCTCTCTCTCTGTCTAATCAATTGGATCTCCGAATCACCCTTTTGTGTAGAGTTTTCC
CGCAATTAGGATTATTCAATCAATGGATAGCAGATCCGGGGAGAAAAAGAGTTTGAACCTATGAAGAACAAAGTCAAATCAAAGAT
CTCAACACAGCTGAATTAGCTAAACATGAGAAGCTCTCGATGTGCCTGCCGGAGAAGAAGAGAGAGAGAGAGACGGAAACCGAGGA
TGAGATGAAAGCCACTCAGTCATCGCCACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAL32135 vernalization 2 protein [Arabidopsis thaliana]9745e-103
NP_567517 polycomb group protein VERNALIZATION 2 [Arabidopsis thaliana]9664e-102
NP_974563 polycomb group protein VERNALIZATION 2 [Arabidopsis thaliana]9664e-102
ACV87734 embryonic flower 2 [Camellia sinensis]6431e-064
CBI38586 unnamed protein product [Vitis vinifera]6393e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q8W5B1 Polycomb group protein VERNALIZATION 29662e-103
Q8L6Y4 Polycomb group protein EMBRYONIC FLOWER 25915e-060
Q9ZNT9 Polycomb group protein FERTILIZATION-INDEPENDENT SEED 24553e-044
Q6DC03 Polycomb protein suz12-A1703e-011
B0R1D5 Polycomb protein suz12-B1481e-008

TrEMBL top hits (Blast detail)Scoree value
Q3E6U1 Putative uncharacterized protein At4g16845.29663e-102
C9E9W1 Embryonic flower 26438e-065
B9GYN4 Putative uncharacterized protein VEF9046365e-064
B9T283 Polycomb protein embryonic flower, putative6365e-064
B5B0L7 Vernalization 2-1 protein6043e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G16845.1 VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor9661e-104
AT4G16845.2 VRN2 (REDUCED VERNALIZATION RESPONSE 2); transcription factor9661e-104
AT5G51230.1 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor5914e-061
AT5G51230.2 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor5914e-061
AT5G51230.3 EMF2 (EMBRYONIC FLOWER 2); DNA binding / transcription factor5914e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  75%
 
61  25%

Unigene MembersMember information