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Information for unigene UN18364

FASTA Sequence
Unigene ID: UN18364Length: 1707 SSR 
GGAGACAAGAAGGTTCTGTCTGAAATCGCCGAGGGAAGAGAGGGAGCGAGCGAGCGAGCGAGAGAGATTTGTAAGGTCAGTGTGTG
AGTTTTTTTTCGCAATGAATCTAAGGATGATTGAGTTTGTTATCGGAGAGGATCCATATAATCTCAAAAAAACGATGATTTTAGTG
TTTCATAATTTTTGTGTGAGAAAGAGATGTGATTGTGTGGCTTGCAGGAGGGAGGAGACGAGTGAGAGAGAGAGAGATAGAGATTA
AGAGGGTGGGGAGAGAGAAGAGAGAGGTTTTGTGAGTTTTGTAAGGGTTTCAAATCCTTATCCAGATCTCGTTGCTCATCTCATCT
GATGGAAAGGAAGCTTGTGGTGCTGGGGATCCCGTGGGAGATTGATTCAGATGGGCTTAAGGATTACATGTCCAAATTTGGGGACT
TGGAGGATTGTATCGTCATGAAGGATCGATCAACTGGAAGATCTCGTGGCTTTGGATATGTCACTTTTGCTTCATCTCAAGATGCT
AAGGATGCTTTGAAAGGTGAACACTTTTTAGGCAACAGAATCTTGGAAGTCAAAGTTGCTACACCCAAGGAAGAGATGAGACAGCC
TGCAAAGAAGGTGACGAGGATCTTTGTTGCTCGTATCCCTCCTTCCGTCTCTGAATCTGATTTCCGAAGACATTTTGAAAAGTATG
GCGAAATCACTGACTTATACATGCCTAAGGACCACAAGTCGAAGGAACACCGAGGAATTGGGTTTATCACATTCGCTACTTCTGAT
TCAGTGGAGGAACTGATGGAAGACACACATGATCTGGGAGGCACAACGGTTGCTGTTGATCGAGCTACACCAAAGGACGACGATCC
TCCTCCCAGGCCACCACCTCCAGCTGCTAGAATGCCTCGCCCACCCATGGCTGTTGCAGCAGGCGGGTTTGGAGCTCCAGGTGGTT
ACGGAGCTTACGATGCTTACATCTCTGCAGCTACAAGATACGCTGCTCTCGGTGCTCCTACTCTCTATGACAATGCCGCTTCCTTC
TATGGAAGAGCTGAACCAACGAGGGGAATAGGAAACAAGATCTTTGTTGGACGCCTTCCTCAAGAAGCATCCGTTGATGATCTCCG
TGACTACTTCGGTAGATTTGGCCGTATTCAAGATGCGTATATTCCAAAGGATCCAAAGAGAAGTGGACATAGAGGTTTCGGATTCG
TTACCTTTGCTGAGAACGGTGTTGCGGATCGTGTAGCCAGGAGATCTCATGAAATCTGTGGACAAGAGGTAGCAATAGATTCAGCA
ACACCTCTTGATGAAGCTGCTGGACCTAGCGCCGCCGGTGGAGGAGGTTTTTTTTCTTTTCGTCCTGAACATTTTGGTGGTTACGC
TGGAGGTGGTCCAATGCGCACTTTTGGTCGAATGTATGGAGGTGGCATGAGCTTGGACGATTGGGGATATGTAGTGCCGAGCGCAA
GACCATCAAGATCAGACTGGAGGTACCGCCCATACTAATGCCACCACCAGACAACAGACATTATCCTATTGTTGTTTTATTTTATT
AAATTTTCATCACTCATCAGATTACATTAAACTATTTACTTGTTATGGTGAGTGAGAGAGAACCTTGCTTTGTTGTTGTTGTTGTT
GAAACATATAAAAGAGCTTTACAAGAAAACATTTTGTGTGTTTTTTTAAGAAAGAAACAAATTTTCATAGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002866967 RNA recognition motif-containing protein [Arabidopsis lyrata subsp. lyrata]17722e-195
NP_568011 RNA recognition motif-containing protein [Arabidopsis thaliana]17211e-189
CAB16795 RNA-binding like protein [Arabidopsis thaliana]9631e-101
XP_001785814 predicted protein [Physcomitrella patens subsp. patens]9584e-101
XP_001752584 predicted protein [Physcomitrella patens subsp. patens]9432e-099

Swiss-Prot top hits (Blast detail)Scoree value
O94432 Uncharacterized RNA-binding protein C660.153174e-028
P48809 Heterogeneous nuclear ribonucleoprotein 27C3093e-027
Q96DH6 RNA-binding protein Musashi homolog 23084e-027
Q920Q6 RNA-binding protein Musashi homolog 23075e-027
Q99020 Heterogeneous nuclear ribonucleoprotein A/B2833e-024

TrEMBL top hits (Blast detail)Scoree value
Q94AC3 AT4g36960/C7A10_40017211e-189
B9EWF4 Putative uncharacterized protein11375e-122
B8A940 Putative uncharacterized protein11341e-121
O23189 RNA-binding like protein9638e-102
A9U4M7 Predicted protein (Fragment)9583e-101

Arabidopsis top hits (Blast detail)Scoree value
AT4G36960.1 RNA recognition motif (RRM)-containing protein17332e-193
AT4G36960.2 RNA recognition motif (RRM)-containing protein17332e-193
AT1G17640.1 RNA recognition motif (RRM)-containing protein3201e-029
AT5G40490.1 RNA recognition motif (RRM)-containing protein2913e-026
AT4G26650.1 RNA recognition motif (RRM)-containing protein1938e-015

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  100%

Unigene MembersMember information