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Information for unigene UN18365

FASTA Sequence
Unigene ID: UN18365Length: 1320 SSR 
CACAATAATAACATTTATATATAACCGATCAATACCGTGGATTTGGGTCACTCCACCGGTCCACAAATTATGCAGCGTTACGTCAA
CGTGGAAACAAACAATGCTGTATTTTAAAAAGAAAACACACACAAGATATAAAAATACATAATTGTGTTTTGCATTTAACTTTCAC
GACCAGCCCCAGAATCCTAGTGATTCACCGTGACCGTGACCGTGCGGCGGCGAAGTGGTGGCCCCAAATACGTCAACAACGAAACA
GCTCCGGTCATTATCACTCCCGTTGTTGTTATGTTCCTCCAGTTGGTGGATGGGTACGATACTTGGGAAGTAAGAGTCACAGCTGT
CTAGTAGTTGAGGAGCGTCTTCTTCGTCTAGTACCGTACTCCCTGAACTCAACCGGTCCTCTGTTTTGATTGGCGGTGGTTCGATA
TGGTTCATGTTCACCGAATCAAGCTGCTGCTGGGGGTTTGCTTCGGGCACTTGACCCGATGGCTCCTTAGTTGCCTCTTCTTTGGC
TTGGAGCTTCTCTGCCAGGGAAGTCATCTGGGATCTGAGGAGATGGTTGTCGTTGAGGATGGAGTCGTAGTTAGAGAGGAGTTGGT
CGTAAGAAGATTTGAGGAGACTGAAGTCTCTCTCGAGCTGCTTTGTTTTCCAACGAGCACGTCGGTTTTGAAACCAGACAGCAACT
TGCCTTGGCTGAAGACCAAGCTTCTTAGCAAGCTCAGTCTTGCGCTCTGGCTCCAGCTTGTTCTCGGTCTCGAAGCTTTTCTCCAG
CAGATGCACCTGTTGGGTAGTGAGGCGACGCTTTTTGTCGGGTGTGTGGTCGTCGTTATAGTCATCGTCGTCGTAAAGATCCTCGT
GGGAGCAAAAGAAGGGCCTTCGCTTTGATGATTCCTCCATGTTCATCATCGATCTTGCTCCTTGGAAGAAGAACATGTTGCCATGG
GCGGCAGAAGGATCGAAGAAAAACGAATTGGATTCCATCTCGATTTAACCAGACAAGAAAAATACAAAGAAAACAGAGAAACTGAG
AGAGAGAGGATTGGGTTCAAAGTAAAGAGAAAGACCGATGAAGCTAAAGGGGATTAGAAGATGATGATCTTATGACGAAAGAAGCT
TGTACTCCATAGTAATCTAGCCGGAGACTCCAACGGACAGATGCAAAATCCCATCATCAAAACAGCAATTACACCCAGAGGGAACC
AGACAAGACCTTTTTTTTTTTCTTTTCGAAATTATAGTTTAACCGATCATTACATCTCAAATAAATTCAGAGAGAGAGAGAGAGAG
AGAGAGTTTCTCTTGGCCTTTGGCTTTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33940 unnamed protein product [Thellungiella halophila]9825e-104
NP_186796 homeobox-leucine zipper protein HAT5 [Arabidopsis thaliana]9243e-097
XP_002882180 homeobox-leucine zipper protein hat5 [Arabidopsis lyrata subsp. lyrata]8912e-093
XP_002278872 PREDICTED: hypothetical protein [Vitis vinifera]7021e-071
CAP16664 homeodomain leucine zipper protein [Solanum lycopersicum]6618e-067

Swiss-Prot top hits (Blast detail)Scoree value
Q02283 Homeobox-leucine zipper protein HAT59241e-098
A2X980 Homeobox-leucine zipper protein HOX164931e-048
Q6YWR4 Homeobox-leucine zipper protein HOX164931e-048
Q9XH36 Homeobox-leucine zipper protein HOX54347e-042
Q6ZA74 Homeobox-leucine zipper protein HOX54347e-042

TrEMBL top hits (Blast detail)Scoree value
B6GVA3 Homeodomain leucine zipper protein6616e-067
B3IX27 Transcription factor Homeobox6365e-064
C6T8D2 Putative uncharacterized protein6365e-064
B9RUU7 Homeobox protein, putative5452e-053
Q8W1K4 Homeodomain leucine zipper protein CPHB-55343e-052

Arabidopsis top hits (Blast detail)Scoree value
AT3G01470.1 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1); DNA binding / protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor9283e-100
AT4G40060.1 ATHB16 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 16); sequence-specific DNA binding / transcription activator/ transcription factor3423e-032
AT5G65310.1 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor3389e-032
AT5G65310.2 ATHB5 (ARABIDOPSIS THALIANA HOMEOBOX PROTEIN 5); protein homodimerization/ sequence-specific DNA binding / transcription activator/ transcription factor3389e-032
AT2G22430.1 ATHB6; DNA binding / protein binding / sequence-specific DNA binding / transcription activator/ transcription factor3371e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  7%
 
122  13%
 
61  7%
 
2110  67%
 
101  7%

Unigene MembersMember information