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Information for unigene UN18373

FASTA Sequence
Unigene ID: UN18373Length: 640 SSR 
GTCACCCGAGCCGACGGAGGAACGAATCGAACTCAAAAGCTTTGCAGAGAGAGAGAGAGATCTTCGTTTTGATCCCCTGGAGGAAT
CGCGACAATGGCGGAAAAGGCAGTGACGATCAGAACCCGAAAATTCATGACTAACAGACTTCTCTCAAGGAAGCAGTTCGTTATTG
ATGTTCTCCACCCTGGAAGAGCCAATGTTTCAAAGGCTGAGCTGAAGGAGAAGCTAGCAAGGATGTACGAGGTCAAGGACCCAAAC
GCCATATTTGTTTTCAAATTCAGAACCCATTTTGGAGGTGGTAAATCATCCGGGTTTGGTTTGATCTATGACAATGTCGAGAGCGC
TAAGAAGCTTGAACCCAAGTACAGACTTATCAGGAATGGTCTTGACACCAAGATCGAGAAATCAAGGAAACAAATTAAGGAAAGGA
AGAACCGTGCCAAGAAGATCCGTGGTGTTAAGAAGACCAAGGCTGGTGATCCCAAGAAGAAGTGAGAGATCACAAGCTAGTATCAA
CCATTTTCTGTTCTTCATAATCAAAACTTTTATGTTTTCTTTGTTTGCAATTAGATTTTCTCTGCAACTAGACATCGAAACATAAC
CAAAGGTTTTTGTTCAATACTTTTTTAAGCTCTTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882383 40S ribosomal protein S24 [Arabidopsis lyrata subsp. lyrata]6622e-067
NP_187143 40S ribosomal protein S24-1 [Arabidopsis thaliana]6542e-066
XP_002874417 hypothetical protein ARALYDRAFT_910915 [Arabidopsis lyrata subsp. lyrata]6442e-065
NP_198158 40S ribosomal protein S24-2 [Arabidopsis thaliana]6352e-064
AAM63791 40S ribosomal protein S19-like [Arabidopsis thaliana]6352e-064

Swiss-Prot top hits (Blast detail)Scoree value
Q9SS17 40S ribosomal protein S24-16548e-068
Q8LC83 40S ribosomal protein S24-26351e-065
Q56JU9 40S ribosomal protein S244324e-042
Q5RAQ8 40S ribosomal protein S244324e-042
Q962Q6 40S ribosomal protein S244299e-042

TrEMBL top hits (Blast detail)Scoree value
B7FMK4 40S ribosomal protein S246172e-062
C6TAW2 40S ribosomal protein S246172e-062
B9RWY8 40S ribosomal protein S246154e-062
A9PC05 40S ribosomal protein S246145e-062
B9HV54 40S ribosomal protein S24 (Fragment)6145e-062

Arabidopsis top hits (Blast detail)Scoree value
AT3G04920.1 40S ribosomal protein S24 (RPS24A)6556e-069
AT5G28060.1 40S ribosomal protein S24 (RPS24B)6369e-067

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  60%
 
92  40%

Unigene MembersMember information