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Information for unigene UN18375
| FASTA Sequence |
| Unigene ID: UN18375 | Length: 856 |
SSR | | GGGCCAATCATCGTTCCCCCCAGGGCTAGAGAGATTAGATTCGAGAGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA
TGAGTTTCCAAGACCTCGAAGCTGGCTCTCGATTCCAATCGCCGAATCGTTTCACCGGCGGGAGGAGGCAGCAGAAACCTCTGTCG
CGTGGAGATCCGTCTCAGGAGGTAGCCGCCGGGATCTTCAGGATAAGCACGGCCGTCAATTCCTTCTTCCGCCTCGTTAATTCGAT
CGGAACGCCTAAGGATACTCTCGATTTGCGAGATAAGCTGCAAAAGACAAGGTTGCAGATATCAGAACTGGTGAAAAATACGTCAG
CTAAGCTTAAAGAAGCTAGCGAAGCCGACCTCCATGGAGCAACTACTCCAATTAAGAAGATTGCGGATGCTAAACTGGCGAAAGAT
TTCCAATCAGTTCTCAAAGAGTTTCAGAAAGCTCAGAGACTTGCAGCTGAAAGAGAAATAACATACACTCCTGTCGTCACTAAAGA
TATGCCTACCAGTTATAATGCACAGGAACTGGATATTGAATCTTTAAGGACCTCCCAGGAGCAAACTCTTCTTCTACAATCAAAAA
GGCAAGAAGTGGTGTTTCTAGATAACGAGATAACATTCAATGAAGCAATTATTGAGGAAAGAGAGCAAGGAATCAGAGAAATTCAA
GAACAGATTGGTGAAGTGAATGAAATCTTCAAGATCTAGCTGTTTAGTCACGATCAAGGAGTTATGATCGATGACATCAGCTCCAA
CATTGATAATTCACATGCTGCACTGCACAAGCCACTTCCCACTCAGAAAGCATCTAAACTCAAAGAGCAACTCATCCTTGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ABB83612 syntaxin-like protein [Brassica oleracea] | 1037 | 1e-110 |
| XP_002873796 hypothetical protein ARALYDRAFT_488543 [Arabidopsis lyrata subsp. lyrata] | 1003 | 9e-107 |
| NP_197185 syntaxin-21 [Arabidopsis thaliana] | 972 | 4e-103 |
| AAM66128 syntaxin homologue [Arabidopsis thaliana] | 972 | 4e-103 |
| XP_002274100 PREDICTED: hypothetical protein [Vitis vinifera] | 727 | 9e-075 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A6M8U5 Syntaxin-like protein | 1037 | 7e-111 |
| Q1WW70 At5g16830 | 972 | 3e-103 |
| Q8LJR4 Syntaxin | 698 | 2e-071 |
| C6TA84 Putative uncharacterized protein | 696 | 3e-071 |
| B9S229 Syntaxin, plant, putative | 685 | 5e-070 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G16830.1 SYP21 (SYNTAXIN OF PLANTS 21); SNAP receptor | 977 | 4e-106 |
| AT4G17730.1 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 677 | 2e-071 |
| AT4G17730.2 SYP23 (SYNTAXIN OF PLANTS 23); SNAP receptor | 677 | 2e-071 |
| AT5G46860.1 VAM3; SNAP receptor | 645 | 1e-067 |
| AT1G32270.1 ATSYP24; SNAP receptor/ protein binding | 379 | 9e-037 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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