RadishBase

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Information for unigene UN18377

FASTA Sequence

Unigene ID:UN18377

Length: 761

GGACTCGATAACCAACCACCGTGCGTCTCGACCTTTACCTTCCTTCTTTCTTTCTCTCTCTCTCAAAAACCCTAAATTCTTCTCAG
GAGATCGATCGAATCCGTTAGTAATGGCGAATAGCAATCTTCCGCGAAGAATCATCAAGGAAACTCAACGTCTACTTAGTGAACCT
GCGCCGGGGATAAGCGCGTCTCCGTCAGAGGAAAATATGCGTTATTTCAATGTCATGATCCTTGGTCCTACCCAGTCTCCTTATGA
AGGAGGAGTTTTCAAGTTGGAGCTCTTTTTGCCTGAAGAATACCCTATGGCAGCTCCTAAAGTTAGGTTTCTCACCAAGATATACC
ATCCTAACATTGACAAGCTCGGAAGGATCTGCCTTGACATACTGAAAGACAAGTGGAGTCCTGCGCTTCAAATAAGAACTGTCCTC
TTGAGCATTCAAGCTCTTCTAAGTGCACCAAACCCAGATGATCCACTGTCTGAGAACATAGCTAAGCATTGGAAGAGTAATGAAGC
AGAAGCCGTGGAGACAGCTAAGGAGTGGACTCGTCTATATGCAAGTGGCGCTTGATGATGGAGTGCAAAAGGAGAACGATCGTTGT
CATTTAAATAACATTATATATGGTGAAACTCTTAAGGTTTTCTTATCTGAATCCTTTTTCTTAAAAAAAAAACTGGGGAAAAAGAT
TTGTACTCTCTGAATCTTCTTTGTATAACTAAAGAATTGAAGACTCGTTTATCCATGCAAACTAACGTTCTCC

Annotation(GO term)

GenBank top hits (Blast detail)	Score	E value
NP_564011 ubiquitin-conjugating enzyme E2 36 [Arabidopsis thaliana]	794	1e-082
XP_002887758 ubiquitin-conjugating enzyme 1 [Arabidopsis lyrata subsp. lyrata]	791	3e-082
ACU15235 unknown [Glycine max]	790	4e-082
BAJ93925 predicted protein [Hordeum vulgare subsp. vulgare]	789	5e-082
NP_565192 ubiquitin-conjugating enzyme E2 35 [Arabidopsis thaliana]	788	6e-082

Swiss-Prot top hits (Blast detail)	Score	E value
Q9FZ48 Ubiquitin-conjugating enzyme E2 36	794	6e-084
Q94A97 Ubiquitin-conjugating enzyme E2 35	788	3e-083
Q9EQX9 Ubiquitin-conjugating enzyme E2 N	651	2e-067
Q0P5K3 Ubiquitin-conjugating enzyme E2 N	648	5e-067
P61088 Ubiquitin-conjugating enzyme E2 N	648	5e-067

TrEMBL top hits (Blast detail)	Score	E value
B7FMQ3 Ubiquitin carrier protein	791	2e-082
C6SZW2 Ubiquitin carrier protein	791	2e-082
Q45W77 Ubiquitin carrier protein	791	2e-082
C6T129 Ubiquitin carrier protein	790	3e-082
B9SBK8 Ubiquitin carrier protein	788	4e-082

Arabidopsis top hits (Blast detail)	Score	E value
AT1G16890.2 ubiquitin-conjugating enzyme, putative	795	4e-085
AT1G78870.2 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase	789	2e-084
AT1G78870.1 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase	777	5e-083
AT1G16890.1 ubiquitin-conjugating enzyme, putative	632	3e-066
AT1G78870.3 UBC35 (UBIQUITIN-CONJUGATING ENZYME 35); protein binding / ubiquitin-protein ligase	557	2e-057

EST library breakdown for ESTs in the assembly


9	15			71%


11	3			14%


12	1			5%


10	2			10%

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