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Information for unigene UN18383
| FASTA Sequence |
| Unigene ID: UN18383 | Length: 1062 |
| SNP | GGAAACACACCCAAGCTCTTCTCTATCTAGTGGTGTTTATTATCTGACACTCTCTCTCTGTCTCTCTCCCTCATCAAGCCGCCGCA
ATGACCGTGGGAGTTTTAGCTTTGCAGGGCTCCTTCAATGAGCACATCGCGGCTCTGCGTCGGCTCGGCGTCCAAGGAATCGAGAT
TAGGAAGGCGGAGCAGCTTCTCACCGTCTCATCTCTCATAATCCCTGGCGGCGAGAGCACCACCATGGCCAAACTCGCCGAGTACC
ATAACCTGTTCCCGGCTCTACGTGAGTTTGTAAAGACGGGGAAACCTGTTTGGGGGACATGCGCTGGTCTTATCTTCTTGGCAGAC
AGAGCCGTTGGTCAGAAAGAGGGAGGTCAAGAACTAGTTGGTGGTCTTGATTGCACCGTGCATAGGAACTTCTTTGGCAGCCAGAT
TCAAAGTTTTGAAGCTGATATCTCAGTACCTCTACTAACATCTAAAGAAGGTGGGCCGGAGACGTACCGAGGAGTCTTCATACGTG
CTCCAGCTGTTCTCGACGTTGGCCCTGATGTCGAAGTCTTGGCGCATTATCCCGTCCCATCAAACAAGGTCTTGTATTCAAGCTCC
ACTGTCCAAATCCAAGAGGAAGATGCTGTTCCAGAAACGAACGTCATTGTTGCTGTGAAGCAAAGAAACTTGTTAGCGACTGCGTT
TCATCCCGAGTTAACCGCAGACACACGATGGCACAGTTATTTCATGAAGATGGCGAAAGAGGTCGAAGAAGGAGCTTCTTCAAGCA
GTAGTGGAACGATTGTTTCTATTGGAGAAACCAGCGTTGGTACCGAGCAACCTAAGCCTGATATTCCTATATATCAGTAACTAAAA
TGAGAGAGAAGAGACTAATTTCTCTTGAAATAAATGAAAAAAAGAAAACTATAGAAAAAGTGTCAGATTCTTTTTGATGTTTTGGA
AAGAAAATGTCAATCTAGTTTGCATTTTTGAGCACACAAGCAAATTTCACAGTGAGCCATGTACTTGTTTTCTTGACACAACTTTG
TATACCGTTGAATCAACCAGTTTATTTGGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866384 ATPDX2/EMB2407/PDX2 [Arabidopsis lyrata subsp. lyrata] | 1199 | 3e-129 |
| NP_568922 Pyridoxal biosynthesis protein PDX2 [Arabidopsis thaliana] | 1195 | 7e-129 |
| ADZ47881 pyridoxial biosynthesis 2 [Arabidopsis thaliana] | 1175 | 2e-126 |
| XP_002530293 Glutamine amidotransferase subunit pdxT, putative [Ricinus communis] | 976 | 2e-103 |
| XP_002313515 predicted protein [Populus trichocarpa] | 972 | 5e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LAD0 Pyridoxal biosynthesis protein PDX2 | 1195 | 3e-130 |
| A0LUK9 Glutamine amidotransferase subunit pdxT | 381 | 8e-036 |
| A9WFU0 Glutamine amidotransferase subunit pdxT | 360 | 2e-033 |
| B9LIK4 Glutamine amidotransferase subunit pdxT | 360 | 2e-033 |
| A1SJA2 Glutamine amidotransferase subunit pdxT | 353 | 1e-032 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SWC4 Glutamine amidotransferase subunit pdxT, putative | 976 | 1e-103 |
| B9HQA4 Predicted protein | 972 | 4e-103 |
| C6TDU5 Putative uncharacterized protein | 957 | 2e-101 |
| B7FJQ9 Putative uncharacterized protein | 921 | 3e-097 |
| Q6QND2 Putative pyridoxine biosynthesis protein | 887 | 3e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G60540.1 PDX2 (PYRIDOXINE BIOSYNTHESIS 2); glutaminase/ glutaminyl-tRNA synthase (glutamine-hydrolyzing)/ protein heterodimerization | 1196 | 2e-131 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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