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Information for unigene UN18392

FASTA Sequence
Unigene ID: UN18392Length: 948 SSR 
GGGTAAACCGAGATACAACATCTAGAAAAACAATTTGTCAGAGCTTTTTCAGCAAAGATAATTTGCTCAAAGACAGTTTACAAAGA
AGATGTCTACCATTCAGGAAAGGAGCGTACCGATTCAATCTCCGGTGGAAGATAAGGCGATGAAACCACTTAACTATGAGACGAAG
AAACCACATAACTATGAGACCATTCTCAGAGACGCAGATCTTCCACTCCCCCCTTCCACCGAACAGCTACGCTCTGGTGTTCTCTT
GAAAAAACTTATCAAATATTGGGTGGACGACAAAAACAGCAATTGCTTCATGATCTTTCCAAGGAAACTCTCTATCACTTGGTCTG
ATGACCCAAACTATTGGACATGGCTTCCCAACGACTCACCAAACGAGAAAGGTGTAGAAGCTGCGGAATTGAAAAACGTGTGTTGG
CTTGACATCACGGGAAAATTCGACACAAGTAATCTTACTCCTGGGATTACGTACGAGGTGGTCTTTCAGATGAAGCTAGAGGATCC
TGCCTACGGATGGGACACACCGGTGAACGTGAAGCTAGTGTTGCCTAACGGTAAGAATAATTTACATGAGAAAAAAGTGAGTTTAA
GGGAACAACCGAGGTATAAATGGGTCGATATTAAAGTCGGAGAGTTCAAGCATGAGAGAGATTCCGTCGGAGAGATCACTTTCTCA
ATGTATGAACATGCGGCTGGTGTTTGGAAGAAAGGACTCTTCCTCAAAGGTGTTGCAATTCGTCCCAAGTATAATATTTAATATGG
GATATAAAAACATTTGATAATCCATATGCACTTATGGACCTATTCTATGTATATTTCACGTCATACCATATATAAATATATATCAA
CGTGTGTGTGTGTCTGTATATCTGATAAGATTTTGATCTACTTTTAATAACAACTTTGATGTTGGTGTTGAATAAAACTAAAACAG
GG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_193719 protein PHLOEM protein 2-LIKE A1 [Arabidopsis thaliana]7961e-082
AAM62948 lectin-like protein [Arabidopsis thaliana]7825e-081
XP_002869965 hypothetical protein ARALYDRAFT_492886 [Arabidopsis lyrata subsp. lyrata]7744e-080
XP_002332139 predicted protein [Populus trichocarpa]5423e-053
ABK95033 unknown [Populus trichocarpa]5362e-052

Swiss-Prot top hits (Blast detail)Scoree value
O81865 Protein PHLOEM PROTEIN 2-LIKE A17965e-084
Q9C8U9 Uncharacterized protein PHLOEM PROTEIN 2-LIKE A44292e-041
Q9C5Q9 Protein PHLOEM PROTEIN 2-LIKE A54212e-040
Q9FHE5 Uncharacterized protein PHLOEM PROTEIN 2-LIKE A73225e-029
O81866 Protein PHLOEM PROTEIN 2-LIKE A22875e-025

TrEMBL top hits (Blast detail)Scoree value
B9NA66 Predicted protein5476e-054
A9PF80 Putative uncharacterized protein5413e-053
A2Q295 Galactose-binding like5314e-052
C6TFU5 Putative uncharacterized protein5073e-049
Q5ZEM1 Os01g0158400 protein5063e-049

Arabidopsis top hits (Blast detail)Scoree value
AT4G19840.1 ATPP2-A1; carbohydrate binding7964e-085
AT1G33920.1 ATPP2-A4 (Phloem protein 2-A4); carbohydrate binding4292e-042
AT1G65390.1 ATPP2-A5 (ARABIDOPSIS THALIANA PHLOEM PROTEIN 2 A5); carbohydrate binding4211e-041
AT4G19850.2 ATPP2-A2; carbohydrate binding3332e-031
AT5G45090.1 AtPP2-A7 (Phloem protein 2-A7); carbohydrate binding3224e-030

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  11%
 
94  44%
 
104  44%

Unigene MembersMember information