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Information for unigene UN18398

FASTA Sequence
Unigene ID: UN18398Length: 1286 SSR 
GGGGGATCTTCTCTTCTCTTCTCGCCCAGCCAGCCAGTCTCTCAATCGCCGATCGAATCTGTGCGTTTTTTATTCTTTCTTTGGAG
TGGAGTACACGACGGACCAACAACCCCTCAACTCAACCAGACCTGTCTGTCCGTCACACGACGACAATGGAAGGCGATCAAGAGAC
ATCTGATTTCACTTTGGTAACGAGGAAGCCTTGCTTCGGTCTCCCAACAGCTTGCCCTAACTGCCTTCCCGCTTACATATACCTGA
AACTAGCCCAGCTTCCTTTTCAACTTGCCTTCAATTCCACCTTCCCTGATTCAGAGGAACTGCCATACTTTGAAAGTGGGACATAT
GTTGCATACAACAATGAAGATGGAGGGGTGATTGAGAAGCTGAAGAAAGATGGGATTGTCAATCTTGACTCTCAGCTCCAGTCTCT
TCCTGAGTATCTATCCTTGAAGGCTCTTATCGTATCATGGCTTGATGAAGCGCTTAGGTATGAGATATGGGTTGGTACCGAGGGGA
TATGTGCTTCCAAGATTTACTACTCAGATCTTCCTTGGGTGATCGGCAAGGTCCTGTTTTATAAGCAGTCGTATTTGGCCAAGAAC
CGTCTAGGACTCACCAAAGAAAACGCAGAGCAAAGAGAAAAACTGATATACAAGAGGGCAAGTGAGGCGTATGAAGCTTTGTCGAC
TAGGTTAGGCGAGCAGAAGTTTCTATTTGAGGACAGGCCGTCGAGTTTGGATGCTTTCCTTCTCTCACACATGCTTTTTACGATCC
AAGTATTACCGGAAACATCAGTGCTTCGGTGCAAACTTCTGGAACGTAGTAATCTTGTCAGATATGCTGAGAAACTCAAGTCAGAG
TTCCTAGAAGCGTCTTCATCATCTCCTTCCCCTCCGCTTCACTCGTTCCCTTCCTCATTTTCAGGAAAGGGTTCGAAGCCAAAGAG
CAAACCAAAGGCAGAAAAGAGTGAAGAGGAGAAAAAATTCAAGAAGAGAGCGAGATTCTTCCTCGCTGCTCAGTTTATAGCAGTTG
TTATTTACGTATCCGTGATGGGAGGAGTTAGTTCCGATGAAGTGGAGTATGAAGATGATGATTAGTACAAGCTAAAGCTTCTCCCT
TATTATTATTGGACCAGTAACTCTTTTACTCTCTTCTTTGTAGACTCATAGACAAAAAGAACCAATCATCTCTCTCTCTCTGCTTT
TTCTTGAATTTTTTTTTTGTTATATTGCAAGACTCTTTGTTGTTCAACCACAAAATCAACTGAACTAACTCTGTTTTGTCCA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002886242 hypothetical protein ARALYDRAFT_480824 [Arabidopsis lyrata subsp. lyrata]14484e-158
NP_565446 metaxin-related protein [Arabidopsis thaliana]14422e-157
ACC68165 unknown [Arabidopsis halleri subsp. halleri]14395e-157
XP_002309019 predicted protein [Populus trichocarpa]10273e-109
XP_002266817 PREDICTED: hypothetical protein [Vitis vinifera]10122e-107

Swiss-Prot top hits (Blast detail)Scoree value
Q4R3I0 Metaxin-11542e-009
Q2TBS1 Metaxin-11498e-009
P47802 Metaxin-11498e-009
Q13505 Metaxin-11452e-008
Q4VBW0 Metaxin-31372e-007

TrEMBL top hits (Blast detail)Scoree value
O64471 At2g19080/T20K24.914422e-157
B2Y4N9 Putative uncharacterized protein14393e-157
B9HBA0 Predicted protein10272e-109
A5B6D4 Putative uncharacterized protein9976e-106
C6T8T4 Putative uncharacterized protein8499e-089

Arabidopsis top hits (Blast detail)Scoree value
AT2G19080.1 metaxin-related14428e-160

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  22%
 
121  11%
 
62  22%
 
94  44%

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