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Information for unigene UN18411
| FASTA Sequence |
| Unigene ID: UN18411 | Length: 941 |
SSR | | GGACACGAAGAGGAAGAAGAGGCAGAAAAGGATGGCAGGAACTTTCCAGCTCACCTATGTCCCTGGTTACACACTTTCAGACAGCA
GCAGGGGCTTCTCTAATTCTGCTGTTGTTTTGACAAAAACAACAACAACTGCTAGATTTCCTTGCTCCTCCTCCTCTCTGTATCAC
AAACTAAATGTACGTCTGACATGTGCCCCCAATACTCGTCGTCCCTTTGTTTGCCGAGCGAGTTCTGGTGAAAGAGACAGTGAAAG
AGAAACCGCCTTGAGGGAACGGTTCGAGAAGTGGTGTCAAACCCACGGCGTCGTATACGGAGGAAAAGAGGAGTGGTTGCGACGGT
TTGAGATATACAAGACTAATCTCCAGCATATAGACTACCACAACTCCCTCAACTTGTCCTCTAAGCTAAGCGACAACAAGTTTGCG
GACTTGACCGAGGCTGAGTTTAGGGCACGTTATTGTGGGGCGAGGGTGAAGACGCCTGAGGTTGTGTCTGAGTACGAGAAACATGA
TGAATCTGACTTTGATTCAGAACATGGCCCTGTGACAGCTATTCTGGAGCCAGAGTCAGAGCTGCAGTTAGACTCACACCAAGAAG
AAGAGGAGGAGGAGGAGAATGTTACGTTAGATGTTTTATCAGATGATGAAGAGGTTGGTGATGAAGCTGTGGAGAGTGAGAATTCA
AGTCTCGAAAGGCCAGCCAAATGAAATGAACGAGTGTGGGGCGTTACTTATTGGGCGAGATTGATGCTGCTTCTTAGTTCAAATCT
AGCTTGCAGCTTATAATCTTTCCTCTCTTAGTGTTGCTTCTATCTGGGTGATTGTTGTTAGCATATATATGACTTGTGGGATAACT
ATAATAATAATGGAGATGCATTAGAGTTGATCCAGGAAACCACTTAATGTTATGGTCTTTTATACAGTTGTTATTATGTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889596 hypothetical protein ARALYDRAFT_887827 [Arabidopsis lyrata subsp. lyrata] | 229 | 6e-017 |
| NP_563764 cysteine proteinase-like protein [Arabidopsis thaliana] | 228 | 8e-017 |
| XP_002525147 cysteine protease, putative [Ricinus communis] | 199 | 2e-013 |
| NP_001150119 xylem cysteine proteinase 2 [Zea mays] | 175 | 1e-010 |
| ACN36881 unknown [Zea mays] | 170 | 4e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LNC1 F9P14.12 protein | 228 | 6e-017 |
| B9SGM8 Cysteine protease, putative | 199 | 1e-013 |
| B6TLC8 Putative uncharacterized protein | 175 | 8e-011 |
| C0PNW5 Putative uncharacterized protein | 170 | 3e-010 |
| B8BD35 Putative uncharacterized protein | 169 | 4e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G06260.1 cysteine proteinase, putative | 228 | 3e-019 |
| AT1G09850.1 XBCP3 (xylem bark cysteine peptidase 3); cysteine-type endopeptidase/ cysteine-type peptidase | 161 | 2e-011 |
| AT4G35350.1 XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase | 150 | 4e-010 |
| AT4G35350.2 XCP1 (XYLEM CYSTEINE PEPTIDASE 1); cysteine-type endopeptidase/ cysteine-type peptidase | 150 | 4e-010 |
| AT1G47128.1 RD21 (responsive to dehydration 21); cysteine-type endopeptidase/ cysteine-type peptidase | 145 | 1e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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