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Information for unigene UN18414
| FASTA Sequence |
| Unigene ID: UN18414 | Length: 775 |
| SNP | ATTCTTTCTCCCCTCAACTAAACCACCAAACACCTCTCGTAGTCTCCGCCTTCTCCACCCTTCCTCCTTTGTTCTCGTTTCGTACA
CAAAATGGCGACTTTTCGAGTCTCTTCCACTAGCATGACGACCACCAAGGCCGTTCTCAGAAGCCAGCCGACGAACCAGCTCATCG
CTAACAAGAGCCAGCAAGTCTCCGTCGGATCGGTCAAAAAAGTCACGAGATCCTTTGGCTTGAAATGCTCAGCCAACTCAGGAGGT
GCGACCATGATGTCAGCGGTGTACAAGGTGAAGCTCATAGGACCAGAAGGGGAAGAGAACGAGTTCGAGGTTCAGGACGACCAGTT
CATATTGGACGCAGCCGAAGAGGCGGGAGTTGACTTGCCTTACTCTTGCAGAGCAGGAGCGTGTTCCACCTGCGCCGGTCAGATCG
TGAAAGGCCAAGTTGATCAGTCCGAGGGTTCGTTTCTCGAGGATGATCACTTTGAGAAAGGTTTTGTCTTGACTTGTGTGGCTTAC
CCGCAGTCGGACTGTGTGATCCATACCCACAAGGAAACTGAACTCTTCTAAAAGACCCGTTCTCGTTTGGTGGTAGTGTGATGCAA
AATTGTTATTTGAGGTATTGTTATTATTATTATCAGTTTCCTTTCTACGAAATTGTGTGTGTTTAAAAGATAATGCTTTTTGTATG
AACACGTCTCAGATATGCCTTTTTAGCTTTCATCAATCGTCACCGGGTTACAACTGGTTAATAAAGTGGTTAAATGTCATTCAGTC
G
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_180320 ferredoxin 3 [Arabidopsis thaliana] | 665 | 1e-067 |
| XP_002880924 hypothetical protein ARALYDRAFT_901657 [Arabidopsis lyrata subsp. lyrata] | 661 | 4e-067 |
| P14937 RecName: Full=Ferredoxin, root R-B2 | 521 | 6e-051 |
| XP_002523809 Ferredoxin-3, chloroplast precursor, putative [Ricinus communis] | 469 | 6e-045 |
| P14936 RecName: Full=Ferredoxin, root R-B1 | 464 | 2e-044 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9ZQG8 Ferredoxin-3, chloroplastic | 665 | 6e-069 |
| P14937 Ferredoxin, root R-B2 | 521 | 3e-052 |
| P14936 Ferredoxin, root R-B1 | 464 | 1e-045 |
| P27788 Ferredoxin-3, chloroplastic | 413 | 9e-040 |
| P94044 Ferredoxin-6, chloroplastic | 373 | 4e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SCU0 Ferredoxin-3, chloroplast, putative | 469 | 4e-045 |
| Q39648 Non-photosynthetic ferredoxin | 462 | 3e-044 |
| B9RPT1 Ferredoxin-3, chloroplast, putative | 459 | 6e-044 |
| B9MYW6 Predicted protein | 455 | 2e-043 |
| A5B3C7 Putative uncharacterized protein | 449 | 9e-043 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G27510.1 ATFD3 (ferredoxin 3); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 670 | 1e-070 |
| AT1G10960.1 ATFD1 (FERREDOXIN 1); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 366 | 2e-035 |
| AT1G60950.1 FED A; 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 357 | 3e-034 |
| AT5G10000.1 ATFD4 (ferredoxin 4); 2 iron, 2 sulfur cluster binding / electron carrier/ iron-sulfur cluster binding | 341 | 2e-032 |
| AT4G14890.1 ferredoxin family protein | 214 | 1e-017 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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