Information for unigene UN18415
| FASTA Sequence |
| Unigene ID: UN18415 | Length: 854 |
SSR | | AAACATCATTCATTCATTCATGCCATTCTTCCATCATCGCGTTTGCTGTCTTACTGACAAAACATATACAAATAATACAACGAGAA
AAGGTATCTCTCTACAAGTCAAAAGCGAATTATAACATAAAGAGAGAGAGAGAGAGAATATATATTATTAAACACAATCATCATCA
CCTCCTGATTTCTCAAAAAGCTTAATCGGCCAATCATCTCTCTACTCATAAGCTGATATTTTAGTTAAAACCCTCTGAAAATCAGA
GATAAGTAAAACCCTCTCTCCTCTTTTCCATCAGGCTCTGCAAAAGCATCTCAGTTACCTTTTCTAATGGCCAGCTTGTACTGGAA
AGCCTCCACTCATCTGTCGCCTTATGTGCTCCGGTATGAGCCTGTTTATAAGCTCTGGTGAAGCCCCAGCTAACTCTTGTTTGAAG
TTGAACAACGGTGGTAGAGGTCGGCCGTTTGGGAGACGAGCATTGGGCTCACGGAGTTCATTGAAAAAAGGATGTGCACATGCTTC
AAGCGCAGTGTAACGCAGGCTCGGTGAGTATTGAAGAAGCCGAGATGCGAGGTCAATGGCTTCTGGAGGCATCCTCTTATGGAAAA
CCTTATGCCATGTAACTAATGGTCTGCTTAGGTTCACCGTTTTTGCCTCCAATTGTAGTAGAAATGATGTGGCCTGTAACAGCATC
ATTTCCCTCTATAACAGCAGCAGACATATCCTTGTCTGTGTCCATATCGGAACGACGTCTAGAAGCATCTCCGTCGCGAAGCTGCT
GCGGCGGCGGCGGAGCAGTAACCGGAGGCTGAGGCCCCAATGATAGTGAGGTCATGTGCTCTCTCTCTCTCTCTCTCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA64408 shaggy-like kinase dzeta [Arabidopsis thaliana] | 489 | 4e-047 |
| NP_180655 Shaggy-related protein kinase zeta [Arabidopsis thaliana] | 489 | 4e-047 |
| AAM65084 putative shaggy-like protein kinase dzeta [Arabidopsis thaliana] | 489 | 4e-047 |
| XP_002881146 hypothetical protein ARALYDRAFT_902112 [Arabidopsis lyrata subsp. lyrata] | 481 | 3e-046 |
| NP_172127 Shaggy-related protein kinase iota [Arabidopsis thaliana] | 447 | 3e-042 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39010 Shaggy-related protein kinase zeta | 489 | 2e-048 |
| Q39012 Shaggy-related protein kinase iota | 447 | 1e-043 |
| Q39011 Shaggy-related protein kinase eta | 428 | 2e-041 |
| Q39019 Shaggy-related protein kinase kappa | 355 | 6e-033 |
| Q9FVS6 Shaggy-related protein kinase delta | 354 | 8e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFK2 AT1G06390 protein | 447 | 2e-042 |
| A5C4K1 Putative uncharacterized protein | 435 | 5e-041 |
| B9S8B2 Glycogen synthase kinase-3 beta, putative | 433 | 8e-041 |
| P93774 Shaggy-like kinase (Fragment) | 433 | 8e-041 |
| A8DPG3 BIN2-like protein | 431 | 1e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G30980.1 ASKdZeta (Arabidopsis SHAGGY-related protein kinase dZeta); ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 489 | 2e-049 |
| AT1G06390.1 GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); glycogen synthase kinase 3/ kinase | 447 | 1e-044 |
| AT1G06390.2 GSK1 (GSK3/SHAGGY-LIKE PROTEIN KINASE 1); glycogen synthase kinase 3/ kinase | 447 | 1e-044 |
| AT4G18710.1 BIN2 (BRASSINOSTEROID-INSENSITIVE 2); glycogen synthase kinase 3/ kinase/ protein kinase | 428 | 2e-042 |
| AT1G09840.1 ATSK41 (SHAGGY-LIKE PROTEIN KINASE 41); ATP binding / protein kinase/ protein serine/threonine kinase | 355 | 5e-034 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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| Software error:
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