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Information for unigene UN18455

FASTA Sequence
Unigene ID: UN18455Length: 994  SNP
GATCAAAGAGCAGAACTTGAACTTAGTTTGACAGTTTAGTACCTTTCTATAACCAGTTTTTTTTTTGCAGAGCATGAACTTGGATA
AAATTTTAGTAAAAAATCCAGACAAAAGAAAAGAAAAATGTTGCATTGCAACACAAGTTAATAGCACAAAAGAGCATATATGTCTT
CTCCCAAGAAGAGAGAGGTTTAGTCTTATTCTTCTGCTCCTTCTGATATTCCTCATAAAAGATATATAGCGCTTTCGATCAGCTTT
CTGCTCATTAGTCAATTAAGTGGACGAGTGTAGCCACACTTGATCGGTTTTTTGGGCAGAACCTGGGTAACTACAATGTTCAATCC
TCCCACACAACGTCCACTGAGTTCCAGCGCCTTCTCTACATCGTCTTCTCCAACGAGATAAACGAAAGCTTTGCTTTTGAGACCAC
CACATGTCCTGTAAGCAAAACAACTAGCTGGTGCGAAATGTTTACACAGCTTGCTCTCGACATCATCCATAGAAAGGGAAGGGTCA
TATCCGGTAACTTTCAAAGTGCGTTGTGTCTGACGGGCTTCTTTCAGAGTAGCCAAGACATCATCAAGGTAATTTTCCTGAAACGG
GTAAGCATAAGTTTGTAAAATCCGTCCTCCCATGTCGCTTCCATTAAGCCTCAACGCCTTTTCTTCGTCTTCTCCGTTAACATAAA
TGAAGGAAAATCTGTTGGGAATATCAGTTTCCTCGTTAATGGGAACATAAACATGTATTATGTTTCCACATGAAGCGAAATGTTTT
CTCAAAGCCTCTTCGACATCTTCCCTACGAAGAGAGGTGTCGTATCCCTCAACCACAATCCTGCTAATACGGCTTTCTCGAATCTC
TGCCTCACAACCATTCAATTCCAGACCTTTTATGGCGGATTCGTCCATGGCGACTGCGCTAGGTTTCCAAGAGGCGATAAAGATTT
ATTTTACTCCACTTCTAATGATTTAGAAACTAGGTCAGTCACAGTCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873094 predicted protein [Arabidopsis lyrata subsp. lyrata]3311e-028
XP_002873095 predicted protein [Arabidopsis lyrata subsp. lyrata]3273e-028
NP_001078524 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]3183e-027
XP_002883446 predicted protein [Arabidopsis lyrata subsp. lyrata]3157e-027
XP_002871317 predicted protein [Arabidopsis lyrata subsp. lyrata]3076e-026

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q67YA0 Putative uncharacterized protein At5g035003182e-027
Q9LZD9 Putative uncharacterized protein F12E4_2502895e-024
Q9LZD6 Putative uncharacterized protein F12E4_280 (Fragment)2511e-019
Q9S755 MZB10.19 protein1937e-013
Q5BPG8 Putative uncharacterized protein1864e-012

Arabidopsis top hits (Blast detail)Scoree value
AT5G03495.1 nucleotide binding3181e-029
AT5G03480.1 nucleic acid binding / nucleotide binding2893e-026
AT3G09160.1 RNA recognition motif (RRM)-containing protein1934e-015
AT5G53700.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nucleic acid binding / nucleotide binding (TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1863e-014
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding1665e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
126  33%
 
92  11%
 
102  11%
 
115  28%
 
63  17%

Unigene MembersMember information