Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18458

FASTA Sequence
Unigene ID: UN18458Length: 1679 SSR 
CGCACCAACAATATTCTTACACGTATCGAATTCACGACTGCGTTTACAAGGTACAAGCGTCTCTCTCTATGGCCTGAGCAAAACTT
GAGCATCTTTGTCTGTGATAACCAAAAAAAAACATGTTCTTGTTTTCTCTTTTTTTTTTTGGTTCCTAAAAAGCTAAAGAAAGACA
TGAGATTTTGATCCAATGGAGATCAAAACCATGAGTCGTGAGCGCTTTGTCTCAACCCGTCATTCCTGGGAAGAGCTGTGAAATCT
TGTTGAACACATCCATTACCTCTTTGTCGTTTTGGTACTTCATGATGTTCATTGGGTTCTCTGAACATTCCATTAAGGCTGCTTGG
ACTCTAGGATTCTGGAATGCCATAGCAACATCAGGGTTCTGCATTATCTTAAAGATGGCTTCTTCTGGAGTCAATCCTATTTGATC
GAACTGTTGCTTCACTTCAGGACTATTCAGATCAAAATTCTTTAAGGTCTCCGTCATTCTCTTGTCCCATTCACCACTCCCACTCA
TATTATTCAGCATGTCCTGTAGCTGTTGACGGTATTGAGGATTTTGAAGCATCCATTTGAAAGTTTCTGGGTTCCTCATCTCCTCA
GGCAAATGTGGGTAAACCATCTTCTGAACTGTTGGATCTTCCATCATTTTCTCTAACGCTTCTACAGACAAACCAGGCCCTCCTTT
CCCAGCGCCCAAAGATTGAAAAACCTCCGAAGCAGTAGCACCATTCGCCGGAGCAGATCCATTTTGCAAAACATCCTCAAATAAGC
GAGCTTCTTTGGGAGCACTGGTTTCAGACACTTCTGCATAGTTGCTAAATGGACTTTCCTTAGCAGTTTCCTCAGGGGAAACATCC
TCGAAGGCGTAGTTCTTTTCTTCTTTCTTGGCTTTGTTTTCCTCTAAGACAACACTTGGCTTATCCACTTCTATATTCTTTACGGG
GGCAGGTTGCGGCTTAGTCGAAGGAGGTGTATCTACTTTTGTCGCTGTCACATCAACAGTAGCACTTGAAGACTGGGATTGAGATT
GGAGCGGCGAGGGAGTAGGACTTGTTTGGGGAGGAAATGGAAAAGGAAAAGGTGATCCTGATCCTGGTCCTGACGGGAATCCAGGA
TTGTTAAACTGGCTGTTCTGCGTGTTCATCTGGTTCATCATCGTCTTCATAGCTGTTTGCATTGCATATTTCTTTAAGTTTGAAGT
TGCCCATGAGAACAAAGCTGATAGCCCAACCCCAACACCAATCCAGAAAAGTGGTGATCCTATGGTGGTTGATGATGACGATGAAG
ATGGTGGTGGCACTGCCGCACTAGGGTAAGCAACAACAGAGGATGTTTGCTGATCACGACTCGAAGAAAAAATACTCGCAAAAGCT
TTGCTCCTGTGCTTCATCACAACCACAGTTTCCCCAGCGTTCTCCGGAGATTTAGAGGTTTTGGAGCAACGGAGGGTGATTCTAGG
AGTCCGGCGCGAAAACCCTACTGGGGTAGTTGTAAGCGAGGAAGTGAAATTGCGTCCGATTAACAACTTGGGAGAAGAAGAAGAAG
AAGATGATGAAGACGAAACTAGGGTTAGGTTCTCCATGTTTATTACTGCAATGAAGAAACAGAAGACAATTCTGGTGGAGAAGGTT
CGACAGATATGATGAGGAAGAAGAGACACTACCACTCTTTGGTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002871727 hypothetical protein ARALYDRAFT_488521 [Arabidopsis lyrata subsp. lyrata]19253e-213
NP_197165 hydroxyproline-rich glycoprotein family protein [Arabidopsis thaliana]19201e-212
XP_002305876 predicted protein [Populus trichocarpa]11459e-123
ABF19057 plastid Tic40 [Ricinus communis]11441e-122
XP_002531917 conserved hypothetical protein [Ricinus communis]11441e-122

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9FMD5 AT5g16620/MTG13_619208e-213
B9H3A6 Predicted protein11456e-123
A3QSJ7 Plastid Tic4011448e-123
B9T0Z8 Putative uncharacterized protein11448e-123
Q9SC41 Translocon Tic4010802e-115

Arabidopsis top hits (Blast detail)Scoree value
AT5G16620.1 TIC4019312e-216

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  25%
 
123  38%
 
82  25%
 
101  13%

Unigene MembersMember information