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Information for unigene UN18478

FASTA Sequence
Unigene ID: UN18478Length: 1406 SSR 
GGATCTCCTCCTCTTACGTAACCCTAGCGAATCTCTGCTAGATCTATCTTGATTCCATTTTCAAATCGCCCTTGAAATCGGGACGC
AAGGTGTGTGGGATTGATTCTTACTAGTCAGAGAGAGATAGAGAGTAATGGATTTGGATCAATGGATTTCGAAGGTCAAAGACGGT
CAGCATCTCTCCGAGGACGAGCTTCAGCTTCTCTGCGAATACGTGAAAGAGATTCTGATTGAGGAGTCGAACGTTCAGCCTGTCAA
CAGTCCGGTCACCGTCTGTGGTGACATCCATGGCCAGTTTCATGATCTCATGAAGCTTTTTCAGACCGGTGGTCATGTTCCCGACA
CTAACTACATTTTTATGGGGGACTTTGTGGATAGAGGTTACAACAGCCTTGAAGTCTTCACTATTCTTTTGCTTCTTAAAGCTAGA
CATCCAGCCAATATTACACTTCTGCGTGGAAATCATGAAAGTAGGCAGCTAACGCAGGTATATGGTTTCTATGACGAATGCCAGAG
GAAGTATGGTAACGCCAATGCGTGGCGATATTGCACAGATGTTTTTGACTATCTTACCCTATCAGCTATTATAGATGGCACAGTTC
TATGTGTTCATGGCGGCCTGTCACCTGATGTCCGAACAATTGATCAGATAAGACTGGTCGATCGAAATTGTGAAATTCCCCATGAA
GGGCCCTTTTGCGATCTTATGTGGAGCGATCCTGAGGACATTGAAACATGGGCTGTTAGTCCACGTGGAGCTGGTTGGCTTTTCGG
ATCCAGGGTCACCACTGAGTTTAACCATATCAACAAGCTTGATCTAGTATGCCGTGCACACCAGCTGGTCCAAGAAGGTCTGAAGT
ACATGTTCCAAGATAAAGGCCTTGTAACTGTATGGTCTGCGCCTAATTACTGCTACCGCTGTGGGAATGTAGCTTCTATATTGAGT
TTCGATGACAACATGGAAAAATCAGTGAAGTACTTCACAGAGACGGAAGAGAACAATCAAATGAGAGGGCCAAGGACTGGAGTTCC
ATATTTCTTATGATGATTACGCTATATTATATTTGTGCCTCCTTACATTGCTGTGATGATGATGATGAAGCCATTGCTGCTACCAT
TGGCAATATGTTCAGTCTCACAAGGTGTTATTATGTAGATATATAATATTATCTACTAATGGGTTTCATTTACTTCCATTATCTAT
GTCCTCTACGCAAAACATTTTTTCCCTTGTGAAATTCAGAAAAGGTGAACACTTTGGTAATAGTTTGTAGTGGTTTTGAGTCTACT
CGTGGATTCTCTCTATTTGTTTTTGTTTTTGTTTTCCCACAATCTTTTCTTCTGTATTTGTTCACTTACAATGTGTTTCCTTAACT
CTTTTGCTGTTGTTAAAATGACATTAATTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_188632 phytochrome-associated serine/threonine protein phosphatase 3 [Arabidopsis thaliana]16252e-178
NP_175454 phytochrome-associated serine/threonine protein phosphatase 1 [Arabidopsis thaliana]16223e-178
BAE98396 phosphoprotein phosphatase [Arabidopsis thaliana]16171e-177
XP_002883219 ATFYPP3 [Arabidopsis lyrata subsp. lyrata]16171e-177
CAA87385 Ser/Thr protein phosphatase homologous to PPX [Malus x domestica]15982e-175

Swiss-Prot top hits (Blast detail)Scoree value
Q9LHE7 Phytochrome-associated serine/threonine protein phosphatase 316256e-180
Q9SX52 Phytochrome-associated serine/threonine protein phosphatase 116221e-179
Q8LSN3 Phytochrome-associated serine/threonine protein phosphatase15989e-177
Q9U9A3 Serine/threonine-protein phosphatase 6 catalytic subunit12035e-131
Q9CQR6 Serine/threonine-protein phosphatase 6 catalytic subunit11623e-126

TrEMBL top hits (Blast detail)Scoree value
C6TK28 Serine/threonine-protein phosphatase15981e-175
Q42912 Serine/threonine-protein phosphatase15981e-175
B9HK17 Serine/threonine-protein phosphatase15919e-175
B9RGI8 Serine/threonine-protein phosphatase15854e-174
C6TJ48 Serine/threonine-protein phosphatase15838e-174

Arabidopsis top hits (Blast detail)Scoree value
AT3G19980.1 ATFYPP3 (FLOWER-SPECIFIC, PHYTOCHROME-ASSOCIATED PROTEIN PHOSPHATASE 3); protein binding / protein serine/threonine kinase/ protein serine/threonine phosphatase16264e-181
AT1G50370.1 serine/threonine protein phosphatase, putative16231e-180
AT4G26720.1 PPX1 (PROTEIN PHOSPHATASE X 1); protein serine/threonine phosphatase10432e-113
AT5G55260.1 PPX2 (PROTEIN PHOSPHATASE X 2); protein serine/threonine phosphatase10216e-111
AT1G69960.1 PP2A (SERINE/THREONINE PROTEIN PHOSPHATASE 2A); protein serine/threonine phosphatase9697e-105

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
95  63%
 
71  13%
 
61  13%
 
121  13%

Unigene MembersMember information