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Information for unigene UN18479
| FASTA Sequence |
| Unigene ID: UN18479 | Length: 1259 |
| SNP | GGATTTTAGCCCTTTGTTTCAAACACATTTCACATCCTTCTATCTCTCTCTTCAAACGTTTTAGTTTTTGAAAGAATAAATCAAAA
GAACTAAAAAACCCTAGAAACAAGAAAATCTTTGTTCTCATACTCGTTCCTGATCATCTAATTTATTACTTGTTGCTGATCATTTA
TCAAGCAAGATGATCAATTTTGAGGCGACGGAGCTGAGGTTAGGGCTGCCTGGTGGCAATCACGGAGGAGACATGGCCATGAAAAA
TAATGGGAAAAGAGGATTTTCTGAGACCGTTGATCTCAAGCTGAATCTTTCATCAACAGCTATGGATTCAGATTCCGGAGTTGATT
TGAATACTATGAAGGAGAAGGTCGTTAAACCACCAGCCAAGGCACAAGTTGTGGGATGGCCGCCGGTACGATCTTTCCGGAAGAAC
GTCATGTCTGGCCAAAAGCCAACCACCATAGATGCCGTTGAAGGAACTGAAAAGACTTCCGGCAGCAACGGAGCCACCTCATCTGC
CTCCATTGGTGCTACCGCAGCTTACGTGAAGGTTAGCATGGACGGTGCACCGTACCTAAGAAAAATTGATTTGAAACTCTACAAAA
CTTACAAAGATCTCTCCGACGCATTAAGCAAAATGTTCAGCTCTTTCACCATAGGCAGCTATGGACCACAAGGAATGAAAGATTTT
ATGAACGAGAGTAAATTGATCGATCTTTTGAATGGATCAGATTACGTTCCAACTTATGAAGATAAAGATGGAGACTGGATGCTTGT
AGGAGACGTACCGTGGGAGATGTTTGTTGATTCATGCAAACGCATAAGAATAATGAAGGGATCAGAAGCAATCGGACTTGCTCCAA
GGGCGTTAGAAAAGTGCAGGAACAGAAGCTGAGAGCTTTAAGGAAAAGACCGGTTCGATCCGGTTGGATATCTCAAACCGAGAAAA
GCCAAACCGGCTCGAAACTACTGTTACGAGCAGGGAGTTTGCGTATAATATTCATAAATAGTAATAATAATATTGTGATGTATTAC
ATTTATAAATTTAAACCCTTTTTGCTATATGTATTATATAATATACATATATATGTATGTATATTTTATTCGGTGGCATTTATATA
TTTCCGCTTTGAACAACTTTTGTTTTTACGCATTATTGTATTGTCTATAAGGTATATCCCTAAGACATCTTAATGTGTTACTTTTG
ATGTGCTAAATTATAATTCACGTTTAGTGTATTTGTTTTTCGACTGTGAACTCAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_187124 auxin-responsive protein IAA16 [Arabidopsis thaliana] | 1125 | 1e-120 |
| XP_002884465 indoleacetic acid-induced protein 16 [Arabidopsis lyrata subsp. lyrata] | 1102 | 6e-118 |
| ABV89663 indoleacetic acid-induced protein 16 [Brassica rapa] | 1090 | 1e-116 |
| BAJ34138 unnamed protein product [Thellungiella halophila] | 1070 | 3e-114 |
| XP_002531288 Auxin-responsive protein IAA16, putative [Ricinus communis] | 852 | 6e-089 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O24407 Auxin-responsive protein IAA16 | 1125 | 5e-122 |
| Q38825 Auxin-responsive protein IAA7 | 748 | 3e-078 |
| Q38832 Auxin-responsive protein IAA14 | 734 | 1e-076 |
| P13089 Auxin-induced protein AUX28 | 578 | 1e-058 |
| Q9ZSY8 Auxin-responsive protein IAA27 | 547 | 6e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q0WNJ2 Auxin-induced protein | 1125 | 8e-121 |
| A8IXW6 Indoleacetic acid-induced protein 16 | 1090 | 1e-116 |
| B9SZ69 Auxin-responsive protein IAA16, putative | 852 | 4e-089 |
| B9I5F9 Predicted protein | 838 | 2e-087 |
| C8CBW3 Auxin/indole-3-acetic acid 3 | 802 | 2e-083 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G04730.1 IAA16; transcription factor | 1126 | 4e-123 |
| AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 749 | 2e-079 |
| AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor | 735 | 8e-078 |
| AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor | 609 | 3e-063 |
| AT4G29080.1 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor | 548 | 4e-056 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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