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Information for unigene UN18479

FASTA Sequence
Unigene ID: UN18479Length: 1259  SNP
GGATTTTAGCCCTTTGTTTCAAACACATTTCACATCCTTCTATCTCTCTCTTCAAACGTTTTAGTTTTTGAAAGAATAAATCAAAA
GAACTAAAAAACCCTAGAAACAAGAAAATCTTTGTTCTCATACTCGTTCCTGATCATCTAATTTATTACTTGTTGCTGATCATTTA
TCAAGCAAGATGATCAATTTTGAGGCGACGGAGCTGAGGTTAGGGCTGCCTGGTGGCAATCACGGAGGAGACATGGCCATGAAAAA
TAATGGGAAAAGAGGATTTTCTGAGACCGTTGATCTCAAGCTGAATCTTTCATCAACAGCTATGGATTCAGATTCCGGAGTTGATT
TGAATACTATGAAGGAGAAGGTCGTTAAACCACCAGCCAAGGCACAAGTTGTGGGATGGCCGCCGGTACGATCTTTCCGGAAGAAC
GTCATGTCTGGCCAAAAGCCAACCACCATAGATGCCGTTGAAGGAACTGAAAAGACTTCCGGCAGCAACGGAGCCACCTCATCTGC
CTCCATTGGTGCTACCGCAGCTTACGTGAAGGTTAGCATGGACGGTGCACCGTACCTAAGAAAAATTGATTTGAAACTCTACAAAA
CTTACAAAGATCTCTCCGACGCATTAAGCAAAATGTTCAGCTCTTTCACCATAGGCAGCTATGGACCACAAGGAATGAAAGATTTT
ATGAACGAGAGTAAATTGATCGATCTTTTGAATGGATCAGATTACGTTCCAACTTATGAAGATAAAGATGGAGACTGGATGCTTGT
AGGAGACGTACCGTGGGAGATGTTTGTTGATTCATGCAAACGCATAAGAATAATGAAGGGATCAGAAGCAATCGGACTTGCTCCAA
GGGCGTTAGAAAAGTGCAGGAACAGAAGCTGAGAGCTTTAAGGAAAAGACCGGTTCGATCCGGTTGGATATCTCAAACCGAGAAAA
GCCAAACCGGCTCGAAACTACTGTTACGAGCAGGGAGTTTGCGTATAATATTCATAAATAGTAATAATAATATTGTGATGTATTAC
ATTTATAAATTTAAACCCTTTTTGCTATATGTATTATATAATATACATATATATGTATGTATATTTTATTCGGTGGCATTTATATA
TTTCCGCTTTGAACAACTTTTGTTTTTACGCATTATTGTATTGTCTATAAGGTATATCCCTAAGACATCTTAATGTGTTACTTTTG
ATGTGCTAAATTATAATTCACGTTTAGTGTATTTGTTTTTCGACTGTGAACTCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_187124 auxin-responsive protein IAA16 [Arabidopsis thaliana]11251e-120
XP_002884465 indoleacetic acid-induced protein 16 [Arabidopsis lyrata subsp. lyrata]11026e-118
ABV89663 indoleacetic acid-induced protein 16 [Brassica rapa]10901e-116
BAJ34138 unnamed protein product [Thellungiella halophila]10703e-114
XP_002531288 Auxin-responsive protein IAA16, putative [Ricinus communis]8526e-089

Swiss-Prot top hits (Blast detail)Scoree value
O24407 Auxin-responsive protein IAA1611255e-122
Q38825 Auxin-responsive protein IAA77483e-078
Q38832 Auxin-responsive protein IAA147341e-076
P13089 Auxin-induced protein AUX285781e-058
Q9ZSY8 Auxin-responsive protein IAA275476e-055

TrEMBL top hits (Blast detail)Scoree value
Q0WNJ2 Auxin-induced protein11258e-121
A8IXW6 Indoleacetic acid-induced protein 1610901e-116
B9SZ69 Auxin-responsive protein IAA16, putative8524e-089
B9I5F9 Predicted protein8382e-087
C8CBW3 Auxin/indole-3-acetic acid 38022e-083

Arabidopsis top hits (Blast detail)Scoree value
AT3G04730.1 IAA16; transcription factor11264e-123
AT3G23050.1 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor7492e-079
AT4G14550.1 IAA14 (INDOLE-3-ACETIC ACID INDUCIBLE 14); protein binding / transcription factor/ transcription repressor7358e-078
AT3G23050.2 IAA7 (INDOLE-3-ACETIC ACID 7); transcription factor6093e-063
AT4G29080.1 PAP2 (PHYTOCHROME-ASSOCIATED PROTEIN 2); transcription factor5484e-056

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  8%
 
213  25%
 
114  33%
 
192  17%
 
92  17%

Unigene MembersMember information