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Information for unigene UN18489
| FASTA Sequence |
| Unigene ID: UN18489 | Length: 1708 |
SSR | | GGGAGAGAATTTGAAAGAGAGAAGGCTGCTCTCTCTCTTGGGTTTCTTCTCAGCTCTTTCGCTTTAGGGGTTTAATCTCTCTCTCT
CTGCTTCAATGTATAGCGGATCTAGCGATGGGGAGAGCCACGACACACCACCGCAGAGGAAGATCCCGCCGGCGTCTTCGATGCTT
TGGGTTAGAAATCTACGACGGTACATTGGTTCCGGCGCTGGATTAGGTTCCGAAGCTCTAATGGAGCTTGAAACAAAAAGAATCTT
GCTAGAGATATTCAAGGACAAGCAACAGAAGAGCCAAGAAGTCACGATATGAGTTTCTACAAAAAGAAACCAGAAGAAGGGTCTAT
TAGTGGAAGAGTCCAGAGGCTTGCAAAATACCGCTTCTTGAAGAAACAATCGGATCTTTTGTTGAATTCTGATGATTTGGCTGCTA
TGTGGAATTGTTTGAGAGAAAACTGTGTGATTGATGATGCCACTGGTGCTGAAAAGATGAACTATGAAGACTTCTGTCACATTGCC
TCTGTATGTACTGAACAAATTGGTCCCAAATGTCGTCGGTTTTTCAGCCCATCCAATTTCATGAAGTTCGAGAAGGATGACGCTGG
AAGGATTGCTATTCTACCCTTCTATCTTTATGTGATGCGCACGGTGTCGCTTACACAAGCTAGGATTGATATGAGTGAGCTTGATG
AAGACTCTGATGGTTTCCTTCAGTCTCATGAAATGGAGTCGTATATTCTTGGTCTAATCCCTAACTTGGCGCAATTAAGGGACATG
CCGGAGCCCTTTACTCAAATGTATTGCCGCATAGCTTCACAAAAGTTTTTCTTCTTCTGTGATCCCCATAGGCGAGGAAAAGCTTG
TATTAAGAAGATACTGCTCAGTAACTGTCTTCAGGAACTAATGGAATTGCATCAGGAAAGTGAGGAGGAAGTCACAGACACAGAAC
AGGCTGAAAACTGGTTCTCTTTGACTTCAGCTCAACGTATATGTGATATGTTTCTTGCACTTGATAAAGATTGTAGTGGATCGCTG
AGCAAACAAGAACTTAAAGAATACGCGGATGGGACCCTAACTGAAATTTTCATCGAAAGAGTGTTTGACGAGCATGTCCGCCGTGG
CAAAAGCGTTTCAGGCAATTCCCGGGAAATGGACTTCGACAGCTTCCTAGATTTCGTTCTTGCGTTGGAGAACAAAGACACTCAAG
AGGGTTTGACATACTTGTTCCGCTGTCTTGATCTCCAAGGGAGAGGCTTTCTCACCACTGCTGATATTCACTCCCTTTTCAGAGAT
GTTCACCAGAAGTGGATAGAAGGTGGGAACTATGAGCTGTGCATAGAGGACGTACGGGACGAGATCTGGGACATGGTGAAACCGTC
TGACCCATTGAAGATTACTCTGGATGATCTCTTGGGATGTAAACAAGGTGGAACTGTTGCGAGCATGCTAATAGACGTGCGTGGCT
TCTGGGCTCATGACAACCGTGAGAACCTTCTTCAAGAAGAAGAAGAACCACCTGAGGAAGAGTCACAGTGATGACGTTTAATTAAA
TGGAAAATGGCTGTTTATATTGTCACTCTTATTTTCTTCTGCTTTGCAATCTGATTTGATCACTGTGATTTCTGAATTTCTTGTTA
CATTAATGCACAACATAGAAAGTGTTATTTCTATTCGTCTCTTGAATATTACAATGAGCAAGTCTTATGGTTAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002871823 hypothetical protein ARALYDRAFT_909871 [Arabidopsis lyrata subsp. lyrata] | 2066 | 1e-229 |
| NP_568364 protein tonneau 2 [Arabidopsis thaliana] | 2046 | 3e-227 |
| XP_002516887 tonneau, putative [Ricinus communis] | 1990 | 9e-221 |
| XP_002275193 PREDICTED: hypothetical protein [Vitis vinifera] | 1962 | 2e-217 |
| XP_002439288 hypothetical protein SORBIDRAFT_09g003830 [Sorghum bicolor] | 1956 | 8e-217 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9JK24 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 727 | 1e-075 |
| Q6AXZ3 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 726 | 1e-075 |
| Q5E9G1 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 722 | 4e-075 |
| Q969Q6 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 714 | 4e-074 |
| Q6DJ05 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit gamma | 710 | 1e-073 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FEE2 Putative uncharacterized protein At5g18580 | 2046 | 2e-227 |
| B9RT18 Tonneau, putative | 1990 | 6e-221 |
| C5Z042 Putative uncharacterized protein Sb09g003830 | 1956 | 6e-217 |
| B8AY44 Putative uncharacterized protein | 1947 | 6e-216 |
| B9N4Z8 Predicted protein | 1947 | 6e-216 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G18580.1 FASS (FASS 1); protein phosphatase type 2B regulator | 2047 | 8e-230 |
| AT1G54450.1 calcium-binding EF-hand family protein | 271 | 7e-024 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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