RadishBase

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Information for unigene UN18491

FASTA Sequence

Unigene ID: UN18491	Length: 1366		SNP
GGAGTTTTCGTCAGTCAGGAAGCAGAGTGAGAGTAAAAAAAATTGAACGACCCGATGACAACTGTCTCCGGCGTCGTTGTTCTACC ATTCCTATCTCCTCCTCCGCTTCGTCGCCCATTCTCCCGCCATCATCTCAGTCTGACCAAGATTCCTAGCGCTGGCTTACGGAGGA GGAAACAGGTCATTGTTGCTTTAGCGGCGGTTACGGCTTCAGAATCGCCATCGGAAGCCGCGTATGATCCGGAGCTCCGTTTGGTT TTCGAGCTCGCCACTGATTCCGAGCTATACGAGCTCGAGAGTATCCTCTTTGGTCCCAGTTACTTTAGTCCTCTGTTGAAATCAAT CCCTAACAAAGGAAGAGGAGGAGGAAGAGGTGAGAGGTTGATGATAGGGGAAGATATTGAGGTTCGAGATGGTTTTATCCAATCTC TGAATCTAGATCTTGTTTCTCGCTGCTGATGCTCGCTCCACTCTCAGGGGTTGGAGACCTTCATACAGAAATGTTTTACTTGCGGT GAGGAATAAGTTGAGTATTCCCTGCTCCAGCCACTTGCCAACGGAGGATCTCGAAGCTGAGATCTTTCTTTATCTTGTTGACAATT TCTCTAGTGAAGCATCAGGGATATTTCCTGGCTTGTGGGATAGTTCTCAAGCATCGGAGGTGCAGGGAAGCTTAGAAGTCGGGCTC AGTAAATGGAAAGTTGAACTACTTGCTGCTCTAGAAGTAGGTGCTTCAGAGGTCCAATCTATGATTCTCAAGGGTGGTGGGATGAT CACATTTGCCAAGATTTATCAGTTGTTGGCTAAGAAACTATCTGGAAAAGTAATCCTTGAAGCTGCCAACTACCAGATAAGAAGAG AGATGCTTAAAAAGGGTGGACAGTTAGCTGCTATTAACTTGGAATCAAGAGCAGCTCTGCTTGCAGCAAAACAAGGGTTTGTAGGA GCTGCATCCAGATACCTTGGCTTAAGAACAGTGATGCAATTAGTCGGTCCAATGATGTGGGGGACGTTACTAGCTGATTTGGTTAT TCAGATGCTTGAAACTGACTACGCTAGAATCTTACGAGCAATTTACGCGTTTGCACAGATTCGAATCACAAAGACATACAGGCTAC CTTGTAAATGAAGTTAAAGTTATTTTCTCTCGACTCTGTGTCTCCACTGTCTCTACGTATTATGTAGGTAACAATGTTTAATTATC ACTCGCCATATGTGGTTCATGTGAAATTAGATGTTACTTCTCGAATGGTAAAAGAGCGCCATGGCTAAACGAGCGAGTTTAGCTTC TTTCGAACGAGCAATTACTATCACGTGTGAATCAAGAAACTTCTTGATTCATACAAAAAGAATAATGTATTTTGCG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
NP_849881 uncharacterized protein [Arabidopsis thaliana]	1046	2e-111
AAO22674 unknown protein [Arabidopsis thaliana]	1046	2e-111
NP_565065 uncharacterized protein [Arabidopsis thaliana]	1046	2e-111
XP_002887486 hypothetical protein ARALYDRAFT_895206 [Arabidopsis lyrata subsp. lyrata]	1040	1e-110
NP_001185391 uncharacterized protein [Arabidopsis thaliana]	1029	2e-109

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
B2GVN0 At1g73470	1046	1e-111
Q84WR4 Putative uncharacterized protein At1g73470 (Fragment)	1046	1e-111
Q8LAD8 At1g73470	1046	1e-111
Q9FX40 Putative uncharacterized protein T9L24.34	992	2e-105
B9N3A3 Predicted protein	867	8e-091

Arabidopsis top hits (Blast detail)	Score	e value
AT1G73470.1 unknown protein	1047	6e-114
AT1G73470.2 unknown protein	1047	6e-114

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


6	6			46%


8	4			31%


9	3			23%

Unigene Members	Member information