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Information for unigene UN18500

FASTA Sequence
Unigene ID: UN18500Length: 928  SNP
TGGTCCTGAAAGGGTTACTCTGCTAGTGGTGAGAAGATGAGCATGGTTGCTTGTGGATGGCGGCACACAATAGCAGTTTCTTATTC
TGGAGCATTGTATACTTATGGATGGGGCAAATATGGACAGTTAGGACATGGGGACTTTGAAGATCACCTTGTTCCTCACAAACTTG
AAGCGCTGAGCAACAGCGTCATCTCCCAGATTTCGGGAGGTTGGAGACATACAATGGCATTGACTTCTGATGGGAAACTATATGGA
TGGGGTTGGAATAAGTTTGGGCAAGTAGGAGTGGGCGATAACTTAGATCAGTGTTCTCCTTTGCAAGTTCGCTTTCCCGACGATCA
GAAAGTAGTTCAAGTCTCATGTGGATGGAGACATACATTGGCTGTGACTGAAAGAAATAATGTGTTTGCTTGGGGAAGAGGTACAA
ACGGACAGCTCGGCATTGGAGAGTCCCTTGACAGGAACTATCCTAAGATTATAGAAGCATTGAGCGTTGATGGAGCAAGTGGACAA
CATATAGAGTCTTCTAATTTTGATCCATCTTCAGGGAAAAGCTGGGTGTCACCGGCAGAGAGATATGCAGTTGTTCCTGATGAAAA
GACAGGACAAACGGATGGTTCTAGCAAAGGCAATGGAAGTGATATGAGTGTCCCCACGAACTGATCTCAAGCTTGTGTTCGATTTT
GAGTTTTTCTTCTTTTTTTTCTCACAAGGTTTTTTTTTTTAACGATCTCTGGCTGTACACCACGTACGTCTGGCCTAGTTTGGGAT
TTGCTTCTTTTTTCTTGGTCGTTTTTGTTTAGTTTGTGTTTTGTTACTCAAACTCCAGTCTCTTTATTTTAACCATAATAATGTCT
TACGAATTATGTGGTTTTTTCTTACCATTGCACTTTCTGATCATGCATATGTTCCATGTTCTATATAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ33982 unnamed protein product [Thellungiella halophila]10863e-116
XP_002866579 UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]10773e-115
NP_201191 protein UV-B resistance 8 [Arabidopsis thaliana]10764e-115
AAD43920 UVB-resistance protein UVR8 [Arabidopsis thaliana]10764e-115
XP_002274569 PREDICTED: hypothetical protein [Vitis vinifera]9081e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q5GLZ8 Probable E3 ubiquitin-protein ligase HERC42859e-025
Q6PAV2 Probable E3 ubiquitin-protein ligase HERC42831e-024
Q5PQN1 Probable E3 ubiquitin-protein ligase HERC42786e-024
Q15034 Probable E3 ubiquitin-protein ligase HERC32751e-023
Q99LJ7 RCC1 and BTB domain-containing protein 22714e-023

TrEMBL top hits (Blast detail)Scoree value
Q9FN03 AT5g63860/MGI19_610763e-115
Q9XHD7 UVB-resistance protein UVR810763e-115
B9SAB0 Uvb-resistance protein uvr8, putative8872e-093
B9HF48 Predicted protein8792e-092
A5B6J5 Putative uncharacterized protein8755e-092

Arabidopsis top hits (Blast detail)Scoree value
AT5G63860.1 UVR8 (UVB-RESISTANCE 8); chromatin binding / guanyl-nucleotide exchange factor10761e-117
AT3G53830.1 regulator of chromosome condensation (RCC1) family protein / UVB-resistance protein-related3028e-028
AT5G16040.1 regulator of chromosome condensation (RCC1) family protein2751e-024
AT1G27060.1 regulator of chromosome condensation (RCC1) family protein2732e-024
AT3G02510.1 regulator of chromosome condensation (RCC1) family protein2687e-024

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  17%
 
85  42%
 
93  25%
 
111  8%
 
61  8%

Unigene MembersMember information