 |
Information for unigene UN18503
| FASTA Sequence |
| Unigene ID: UN18503 | Length: 931 |
SSR | | GGCTCTTCGATCAGAGCCGCGTCTTCTCTCTCTCTCTCTCTCTCTCTTTGAATCAAATTTTCTTCGATTTCGCATCTCTCAGGTTG
GAGCTATAGAGCGTGAGATCTATCCCGCAAAGACCCTACCTTTTTTATTACACTGCACTCCTAATGTCGGCCCTTGTGGCGCTATG
CAGAGCTCGAACTGCTGCTTCTTCGTTGAACAGCCTTGTTCGTCCAGCATTTCGCAGTCTCTCTACAGGTTTTGGTGATGTGCAGA
ACAAAACACTTGTGGCAGAAATGGAAGAAAAGATGCTCCACATGGACATCAACTCAATGATCGGAAGTTCCATGCCACTAGGTATG
ATGCGCATAGGAACAATCATCCACAACATCGAGATGAACCCTGGTCAAGGCGCCAAGCTAGTCCGCGCTGCAGGAACAAACGCCAA
GATCCTAAAGGAGCCTGCTTCAGGGAGATGCTTGATAAAGCTTCCATCAGGGGACACCAGGTGGATCAACGCCAGATGCCGTGCTA
CTATCGGTACAGTGTCGAACCCGTCTCATGGAGTGAAGAAGCTGTATAAAGCAGGGCAGAGTAGGTGGCTGGGGATAAGGCCTAAA
GTGAGAGGTGTGGCGATGAATCCTTGTGATCATCCACACGGTGGTGGTGAAGGGAAGGGCAAAAGTAGTGGAAGCAGAGGAAGGAC
TTCGGTTAGCCCTTGGGGGAAACCGTGCAAAGGAGGTTACAAGTCAGCTAGTGTCAAGAAGAAGAAGAAGAGATTGGCAGCTAGAG
AAGCCAAGATGTGATTCATTTGATGAAAGGATGGTTTTAACTCTCAGGATTGTTTTAATGACATTGTTGAATCTGTGAGAGTTTTA
AGTTTAATAAATTCAGAACAATCGTTGATCCGTTATGGATGAAGATGGTATGAAATTATGAACGTTGCCAG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002880081 ribosomal protein L2 family protein [Arabidopsis lyrata subsp. lyrata] | 996 | 7e-106 |
| NP_566007 ribosomal protein L2-like protein [Arabidopsis thaliana] | 994 | 1e-105 |
| AAM64400 unknown [Arabidopsis thaliana] | 986 | 1e-104 |
| CAA57902 ribosomal protein L2 [Arabidopsis thaliana] | 846 | 2e-088 |
| AAK95391 ribosomal protein L2 [Gossypium arboreum] | 635 | 5e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P0C8K6 60S ribosomal protein L2, mitochondrial | 501 | 8e-050 |
| Q2F969 60S ribosomal protein L2, mitochondrial | 501 | 8e-050 |
| P92812 60S ribosomal protein L2, mitochondrial | 501 | 8e-050 |
| P26859 60S ribosomal protein L2, mitochondrial | 461 | 3e-045 |
| O21247 60S ribosomal protein L2, mitochondrial | 391 | 4e-037 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZU4 Expressed protein | 994 | 8e-106 |
| Q8LCY4 Putative uncharacterized protein | 986 | 7e-105 |
| Q39213 Ribosomal protein L2 | 846 | 1e-088 |
| Q8VZZ6 Ribosomal protein L2 (Fragment) | 635 | 3e-064 |
| B9IJ49 Predicted protein | 615 | 7e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G44065.1 ribosomal protein L2 family protein | 995 | 4e-108 |
| AT2G44065.2 ribosomal protein L2 family protein | 995 | 4e-108 |
| ATCG00830.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 317 | 2e-029 |
| ATCG01310.1 encodes a chloroplast ribosomal protein L2, a constituent of the large subunit of the ribosomal complex | 317 | 2e-029 |
| AT3G51190.1 structural constituent of ribosome | 216 | 8e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
