Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18510

FASTA Sequence
Unigene ID: UN18510Length: 1351 SSR 
GGAAACAAAGCCCTTGCTTTCGTCCATAGCACTGTAGCAGTCATTACGAGCCCTCGAATCTATCTGCCTTTTATCATCCGACTAGA
GAAGAAGAAGAAGAAGACCAACCCCGATCTGAGCAATGGCAATGGCTGTTTTCCGTCGCGAAGGGAGGCGTCTCCTCCCTTCAATA
GCCGCTCGCCCAATCGCCGCCATCCGATCTCCTCTCTCTTCTGACCAGGAGGAAGGACCTCTTGGAGTTCGTTCTATCTCAACTCA
AGTTGTGCGTAACCGGATGAAGAGTGTGAAGAACATCCAAAAGATCACAAAGGCCATGAAGATGGTTGCTGCTTCCAAGCTAAGAG
CTGTTCAAGGCAGAGCTGAGAACTCCCGTGGACTTTGGCAGCCTTTTACTGCTCTTCTTGGAGACAATCCCAGCATTGATGTGAAG
AAGAGTGTGGTGGTCACTCTCTCTTCTGACAAGGGTCTCTGTGGTGGAATTAACTCCACTGTTGTTAAAGTGAGCAGGGCTTTGTA
CGAGTTGAATGCTGGTCCTGAAAAGGAGGTGAAGTTTGTTATTGTGGGAGAGAAAGCAAAGGCTATAATGTTTCGTGACTCAAAGA
ACGACATTTCCCTTACTGTTACAGAGCTGAATAAGAATCCACTCAACTATGCTCAGGTCTCAGTTTTAGCTGATGACATCCTGAAG
AACGTTGAGTTCGATGCTTTGCGCATTGTTTACAACAAGTTCCATTCTGTCGTCGCATTTCTACCGACTGTGGCCACTGTTTTGTC
ACCTGAGATTATTGAGAAGGAGTCTGAAGTGGGAGGAAAGCTCGGTGAGCTCGACTCATACGAGATTGAAGGTGGTGAAACAAAGG
GAGAAATTCTGCAGAATCTGGCCGAGTTCCAGTTCTCTTGTGTAATGTTCAATGCGGTGCTGGAGAATGCGTGTAGTGAGATGGGA
GCTAGGATGTCTGCCATGGACAGCTCAAGCAGAAACGCAGGAGAAATGCTTGACCGTCTCACCCTCACTTACAACAGGACTCGTCA
AGCTTCTATCACAACAGAGCTTATCGAGATTATCTCTGGAGCCTCTGCACTTGAAGCCGCTAAATAAGCACATTCTTGTTTGCGTT
GACTTGGTTTTTGATACTCGTCCACCTTGAAGGAGACAGTGTGTTTTGAATTCTCTAAGGACTACTGAGTCAGTTTTCCTTTGCTG
GCTTCTCGTTGAGGCTACCAGTCTTTGCTCAAAGGATTTTTCAGAATAATATCCCTGTAATTTCCAGCAGGATTACTGATGATTGC
ATTAACATTTGTTCTGATTTCAGTACACTTCCTACCAGTCTTTGCTGAAAGGATTTTTCAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_180863 ATP synthase subunit gamma [Arabidopsis thaliana]15605e-171
AAM96955 mitochondrial F1-ATPase, gamma subunit (ATP3_ARATH) [Arabidopsis thaliana]15571e-170
XP_002881258 gamma subunit of mitochondrial F1-ATPase [Arabidopsis lyrata subsp. lyrata]15571e-170
BAE98585 mitochondrial F1-ATPase, gamma subunit [Arabidopsis thaliana]15561e-170
XP_002531492 ATP synthase f1, gamma subunit, putative [Ricinus communis]13071e-141

Swiss-Prot top hits (Blast detail)Scoree value
Q96250 ATP synthase subunit gamma, mitochondrial15602e-172
P26360 ATP synthase subunit gamma, mitochondrial12725e-139
Q4FP37 ATP synthase gamma chain4501e-043
A1B8N9 ATP synthase gamma chain4491e-043
B8IN02 ATP synthase gamma chain4472e-043

TrEMBL top hits (Blast detail)Scoree value
Q7GB12 ATP synthase gamma chain15603e-171
Q8L7F2 ATP synthase gamma chain15577e-171
Q0WWB3 ATP synthase gamma chain15561e-170
B9SZS3 ATP synthase gamma chain13077e-142
C6T8L7 ATP synthase gamma chain12826e-139

Arabidopsis top hits (Blast detail)Scoree value
AT2G33040.1 ATP synthase gamma chain, mitochondrial (ATPC)15611e-173
AT1G15700.1 ATPC2; enzyme regulator1972e-015
AT4G04640.1 ATPC1; enzyme regulator1533e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
98  67%
 
83  25%
 
61  8%

Unigene MembersMember information