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Information for unigene UN18512

FASTA Sequence
Unigene ID: UN18512Length: 1199 SSR 
GGACAGAGCTGGATTGATGCTCATTATAAAGCTATAAAAAGGTTCTCTCGTTCATACATGGGGTCTTGATTTAGCATTCATGAAGA
AAGTTTCTACAATTGAACAACGCAGTTTTGGCTTGAGGTCTCCATGTACTTGATTTAGTCTTTTACAAAGTAATTCCAACAACAAC
AACAAAATTGTCAGCCTAGACCTCAAGCCCACACCATTGATACCATTTTTTTTCAAAGTGAAGAGTGTTTGCTTTTCATAGTGCAC
GCATCAAGGTCGACGTTGCAGCTTCGCGTTTCATCTGTGCAGCTTTGCCACTCCCTCTGAAGTATGCATATACTTGCTGAATCACC
CAGATATTGAGAAATGTTTCGATGCAGAAGAACCCCGCCCCAATGAAATACAATATTCCGACCGCAGCATTAGTAGTTATAAGCTC
AAGTGCTGGCAAGAAACCTGTGAGAGACTTCCCTTGAAAGATGACTGGTGGAGCAACTGCAGCAAAGCCGCAGAATGCAATGTGAA
ACACGTAAAACACGAAGAATGTTCCAAACTTCAGGGCACTATCAGTTCTGGAAGCTCGGTAAAGAGGACGATACCATAAGACGTAA
GCACCAGGGACCCCAGAAATGAAGTAGATGATTGACATAAGCCATATAGTGGGACCTCCTCCTTTGATCCAAGCTACAGTTACTGC
CACAATATTCCACAAGAGACATCCTACTAATCCTAACTAAGGTGGTGAATGCGACGTATTGGATCTTCTGTAAGTGAATCGGAATC
TCGTTAGGGATGTCATGATGAATTAGAGGGAAAAACTCTGGCCAGTTCTTCTCCTCAATGACAACTCCAGTTTTCGCTATTGCATC
TTCTCTTCTTTTAAGCTCCTGCTCTTTCCGGTTCAATTCGTTCTCCTTAGCCTGAAGCTCCATCTCTTTAGCTCGAATATCCTTTT
CGGAATCCAAAGGGATATCGATGGTAGCACCACCACGATCATGAGGTTCAGGTGGGAGAGGCTTGAGATAGGAGGAGTTGCTTGTA
GGAGGAACACTTGTATTATCCGCAAAAGGATTGGTTTCTTCATCAGCAAATGGATTAGAATCTTGTCGTGCCATTTTCTGAGATTG
TATGTTTTTTGTAAGATCAAGAAACTTTTATTTCAAGAAAGAGTTTTGGAGATTAAGGAGAGAATGGTTTCAACGAATGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002892168 secretory carrier membrane protein family protein [Arabidopsis lyrata subsp. lyrata]7792e-080
NP_563686 secretory carrier-associated membrane protein 2 [Arabidopsis thaliana]7754e-080
T00903 hypothetical protein F21B7.17 - Arabidopsis thaliana6643e-067
NP_179680 secretory carrier-associated membrane protein 1 [Arabidopsis thaliana]6473e-065
XP_002886310 secretory carrier membrane protein family protein [Arabidopsis lyrata subsp. lyrata]6473e-065

Swiss-Prot top hits (Blast detail)Scoree value
Q9LR68 Secretory carrier-associated membrane protein 27752e-081
Q9SKT3 Secretory carrier-associated membrane protein 16471e-066
A2YMP7 Putative secretory carrier-associated membrane protein 16122e-062
Q8H5X5 Secretory carrier-associated membrane protein 16122e-062
Q9M5P2 Secretory carrier-associated membrane protein 36051e-061

TrEMBL top hits (Blast detail)Scoree value
B9I680 Predicted protein6411e-064
B9N299 Predicted protein6355e-064
B3TLU6 Secretory carrier membrane protein6231e-062
B6TAX3 Putative uncharacterized protein6231e-062
C6TF49 Putative uncharacterized protein6212e-062

Arabidopsis top hits (Blast detail)Scoree value
AT1G03550.1 secretory carrier membrane protein (SCAMP) family protein7761e-082
AT2G20840.1 secretory carrier membrane protein (SCAMP) family protein6489e-068
AT1G61250.1 SC3 (SECRETORY CARRIER 3); transmembrane transporter6067e-063
AT1G11180.1 secretory carrier membrane protein (SCAMP) family protein5842e-060
AT1G32050.1 secretory carrier membrane protein (SCAMP) family protein4581e-045

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
62  33%
 
122  33%
 
72  33%

Unigene MembersMember information