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Information for unigene UN18520

FASTA Sequence
Unigene ID: UN18520Length: 812 SSR 
AATCTTGACTACAATTGTCCACCTGGCAAACCGGATAGTTCCCCGGAGATCCAGACCGACCCTTCTTGCTCGGTCTAGCTGCTGCT
TCCTCCTCCAAGGCGTTGCTGGCGTTGTTTAGACAGCTTCCGAGATTCAAATCAAGCCCTCTCCTCTCTTCTTCTCCTACGTGAGA
TTCTTCCACGGGTTTAGCTTCGAATCTGCGGCTATCCCAATCCCACATGTTAGAGCTCCACTGCTGATGCTGAGGCTGAGATGGAG
GAAGGAGACGGTTGGGGGGGATCTGGTGGTGATAGAGGTTGCGTTTTCTCCCCATCGGAGAAAGCGATTGGTGTATGAATATCGGA
GAAGCTACCTGACCTCCTACTTCTTCCATCTCTCTCTCTCTCTCTCTCTAAACCTCCAAAATCGATCTCAAAAATCCTTTCTTTTT
TTTTGTTGTTCCAAATAAAGATTCAGACTTTTTTTTCACCAAGAGAATCAATCTACGGGAAGCACGAATCAGCAACGTATCTAAAC
ATATCTCTACGCTTTAGCTCCAATTCAAGTAAACAGGGGAATCTAATCGCAGCTTCTTCAAGCGGCATCAAACCTCAGCTCGAGAG
AAGAACATCACAGAGCAGAGCTTCAAAAAAGGAATCTTTAGCTTTCCCGATCTGATCCAGGAAACAAAAGAGAAAAGATAAGATTT
TTTTTTCTCTACTCACGAGCTTCTCTCTCTCTCTCTCTTGAGTGGACTTACTCGAGCAAAATCTCAGATTTATCCTTGTTCGTCGT
CGTCGTCGTTTCCTTCGTCCTTGTTCTTCTCCTTTCTG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173522 squamosa promoter binding-like protein 14 [Arabidopsis thaliana]3102e-026
BAJ34640 unnamed protein product [Thellungiella halophila]2465e-019
XP_002301891 predicted protein [Populus trichocarpa]2214e-016
AAG51947 unknown protein; 70902-74753 [Arabidopsis thaliana]2053e-014
XP_002890420 hypothetical protein ARALYDRAFT_472338 [Arabidopsis lyrata subsp. lyrata]1812e-011

Swiss-Prot top hits (Blast detail)Scoree value
Q8RY95 Squamosa promoter-binding-like protein 143109e-028
Q700C2 Squamosa promoter-binding-like protein 161584e-010

TrEMBL top hits (Blast detail)Scoree value
B9GPL8 Predicted protein2213e-016
B9R8V3 Squamosa promoter-binding protein, putative1523e-008
B9H5Y0 Predicted protein1301e-005

Arabidopsis top hits (Blast detail)Scoree value
AT1G20980.1 SPL14 (squamosa promoter binding protein-like 14); DNA binding / transcription activator/ transcription factor3108e-029
AT1G76580.1 transcription factor1583e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
123  60%
 
82  40%

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