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Information for unigene UN18545
| FASTA Sequence |
| Unigene ID: UN18545 | Length: 1331 |
| SNP | GATTATTATCCTTTTGTATTGAATGTAACTATAGTAATTTAAAATTCTTGATCAGTTTGTCACATACGGTCTCTTGCACAGACATA
TATTACCTTTTTATGTAAACACAAAAAAAAAGCACAAACCCCTTTTTGAACTATCATAGCGCCAATGGTACAGTTTTGATTATATA
CTGGTCGTAACCACGTAGTTTTAAGATCAGTCACTAGTCAATGCCATTCGTTGTTTCTGAACTTCTGATGGCAGCTTAACATCGGT
TGCTAATCCAAGGGCTTGGAGGAATCTAACAACATACCAAGTCATATCAAGTTGCCACCACTCTAGGCCATGTCTAGCTGAAAACT
CAAAAGCATGGTGATTGTTGTGCCATCCTTCTCCAAACGCAAGAGCTGCTACCAACCAGTTGTTCTTAGACAGGTCTCCAGTGTTC
CATGCTTGTTCCCCCCATACATGACAAGCTGAGTTTACTAACCAAGTTATATGATACACCCATACTATTCTTACACCCATCCCCCA
AACAACGAAGGGGAAGCCTCCAATTGCGTATAGAGCAACTGCTAGAGCCAGCGGATGCCAAATGTAAGTAGATCTAAGGAACTGAT
AGAACGGCTGCTTCTCTAGATCTCCAACATTATTACGCTCACCTACCCTTTGGGTGATAGTATTGGCATCAAACATCCAATTCATA
TGACTAAACCAAAACCCATCAAGTGGACTATGAGGATCTCTGTCTGAATCACAGAACTGATGATGGTACCTATGTGTACTCACCCA
ATCAATAGGGTTGCCCTGAAGAGCTTGAGTCCCACAATAAGCAAACAAGTACTCAAGCCATTTAGGAAGCTTGAAGCTCTTATGAG
AGAGATTCCTATGGAAAGATAGAGTAACACCAAAAAGCCCAGTAACGATATAAAGCCCAAAAGCAACCAACACAGCTCTCCAGTTA
AACTGAAACGGAGCCAAAAGGCTAAGCACATGCATTGACAACACCACAGCAACAGCTCCAAAGTCCATCGGCAACCATTCTCTTTC
CCACCACGGCACCGTATCCTTCTTCTTCTTCACCATCACATCAGATAGCATTATCCTTCTGTAATCTCCCGGCTCCGCAGCTGATG
CGGTGACATCTCGCTTCGGACCCTTTTCAGAGAATGCGGAGACGAGGCTCGGGAGCTTGAAAGGAGCGAGCTTTTGGCTGTGGGTG
AGAGAGATTCTGGTGAGGTTTAACGACGGTGGTGTGGTTAGAGTTCGTGGAGGTGAAGAGAGGCAAAAAGGCTTGGACTTTGTTAG
TGGGGAAGTCAAAAGAGAAGCCATTGTCGACGTGATCCCCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33684 unnamed protein product [Thellungiella halophila] | 1778 | 3e-196 |
| NP_566529 palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase [Arabidopsis thaliana] | 1729 | 1e-190 |
| AAK92773 putative delta 9 desaturase [Arabidopsis thaliana] | 1725 | 4e-190 |
| XP_002882967 hypothetical protein ARALYDRAFT_479040 [Arabidopsis lyrata subsp. lyrata] | 1725 | 4e-190 |
| AAM63459 putative delta 9 desaturase [Arabidopsis thaliana] | 1720 | 1e-189 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q949X0 Palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic | 1729 | 5e-192 |
| Q9LVZ3 Probable lipid desaturase ADS3.2, chloroplastic | 967 | 1e-103 |
| O65797 Delta-9 acyl-lipid desaturase 1 | 966 | 2e-103 |
| Q9SID2 Delta-9 acyl-lipid desaturase 2 | 940 | 2e-100 |
| Q9LMI3 Delta-9 desaturase-like 5 protein | 907 | 1e-096 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| D3YLK2 Delta-9 fatty acid desaturase | 1325 | 6e-144 |
| B9RV72 Delta 9 desaturase, putative | 1304 | 2e-141 |
| B9I0S1 Predicted protein | 1209 | 2e-130 |
| Q8S4Q3 Desaturase delta 9 | 1192 | 2e-128 |
| A9NXX9 Putative uncharacterized protein | 1189 | 3e-128 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G15850.1 FAD5 (FATTY ACID DESATURASE 5); 16:0 monogalactosyldiacylglycerol desaturase/ oxidoreductase | 1730 | 3e-193 |
| AT3G15870.1 oxidoreductase | 967 | 1e-104 |
| AT1G06080.1 ADS1 (DELTA 9 DESATURASE 1); oxidoreductase | 966 | 1e-104 |
| AT2G31360.1 ADS2 (16:0Delta9 Arabidopsis desaturase 2); oxidoreductase | 940 | 1e-101 |
| AT1G06360.1 fatty acid desaturase family protein | 907 | 9e-098 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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