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Information for unigene UN18551
| FASTA Sequence |
| Unigene ID: UN18551 | Length: 1464 |
SSR | | GGGCATCAACAAACGTGTACTGACAATAATAAACACACACACACAAGAATAAGTACAAAACAAGAGCCTGATCATGTCAAAGCACG
CATTCACACATACACATGTACAAGTACAACAAAAGAGCTTGATCATGTCAAAGCACGCATTACACACACAGAGAGAGCGAGGTACA
AGTACAGCAAGAACCTGATCATGTCAAAGCACGTGATCACACTTGCGTTAAGGGGAGCCTTCTGTGGGCTAGAACTATACACGAAA
CACCCACAAACCATTGACGAGTCTGGAAGAAACTCGTGTCGGAGAAAAATATAGGTGCTACTAACTTATAGAAAGCAGCGAAAACA
ATAGCGATATAGAGCTCTTCTAGAATCGACATTTTATTTTCAGTGAACATGTGAGGTAGCTGGCTCTTAACATCATCAACAATCGC
GTCAACAAGATTGCTATCAATGCTGATTCTTTGTGAGGTGAAGCCGGTGTTGGAGGAAACAGACTTCACAGAACTCTTCCAACTTT
CTGCCGTATTCCTCTCTTCAGAGGACAGTCTCTGCAACGTTTCTTCAAAACAGCTTCCAAATTTACCTGTGAAATTTTTCACGTCG
GTTGTGTTCACCCTGTAGAAGACAGGGATCACTCTGAGTTTGCCGCCCTTCACGCGCTTATCTATCCTCGCCACCTCATTTAAGCA
CCACTCTGACTCCGAGAACCGGTCAGAGAATATCACAAGTGCTATTTTCGAGTCGTCGATCCTCTTGAAGAGGTTTTCAAGGGATC
TCCCTTTCAGCTCATGGGTATCTATGAAAACGTTGACCCTTGCATCTTCCAAAGCTTTAACTACATGGCTCACGAAGCCGTTGCGT
AGTTCTTCTCCCCGGAAACTGACAAACAGCTGAGGTCGCGATGGTTGTTGGCAAACAACCGCAAAATAGACAAAAAAAGATAAGAA
TAAAAGAACATAAAAAAGTCCGATATCTGAAATCAGGAACGGCGGAGGACCAACTCGTTTAACCATGTGTTTTGATAGAGTTTGGT
GAGGGTATAGGTTTGTCAAACTAAGCCAACCCTGAACAAGAGAAAATGGAAAACCCTATATAAAAAGTTGGTAGATGATCAGGTAG
AGCCTTCTTATTAGATCATCTCCAATCGAATCATTTTAAAAAAATATAAATTTATTCTAATCATACTCTACTTTTAAATGAATGAT
AAAGCTACGAGAACAAAATATTCTATTTGTGATTATCAGCTGGGTTTATGATAGTTGGTGTATTAGTGGAGGAGGCTCCGTGTTGG
AAGACAAGTTAAGTCGATGTGGGCGATATTTGAGGTCGTATTTACTGGCGGCTAATTAGCTATTCCGAAAAATATTTTGTGTTTTT
TTAGCTTATGTGATTTGTGACAGAAAATGGGTGAGAAACAGAAGAATTTCAGAAGAGAAGAGAAAAGATTAAATATTTTGTTATTT
CC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_193725 Toll-Interleukin-Resistance domain-containing protein [Arabidopsis thaliana] | 734 | 3e-075 |
| CAA16600 downy mildew resistance-like protein [Arabidopsis thaliana] | 712 | 1e-072 |
| XP_002865319 transmembrane receptor [Arabidopsis lyrata subsp. lyrata] | 392 | 1e-035 |
| NP_199303 Toll-Interleukin-Resistance domain-containing protein [Arabidopsis thaliana] | 387 | 6e-035 |
| ACP30631 disease resistance protein [Brassica rapa subsp. pekinensis] | 378 | 6e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FHE8 Protein PHLOEM PROTEIN 2-LIKE A6 | 322 | 8e-029 |
| Q9FHE9 Protein PHLOEM PROTEIN 2-LIKE A8 | 306 | 6e-027 |
| Q9C5Q9 Protein PHLOEM PROTEIN 2-LIKE A5 | 304 | 1e-026 |
| O82500 Putative disease resistance protein At4g11170 | 249 | 2e-020 |
| Q40392 TMV resistance protein N | 236 | 8e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49419 Downy mildew resistance-like protein | 712 | 8e-073 |
| Q6NPD9 At5g44900 | 387 | 4e-035 |
| Q56Y44 Putative uncharacterized protein At1g51280 | 384 | 9e-035 |
| D1GEI9 Disease resistance protein | 378 | 4e-034 |
| D1GEG5 Disease resistance protein | 377 | 6e-034 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G19920.1 disease resistance protein (TIR class), putative | 734 | 1e-077 |
| AT5G44900.1 transmembrane receptor | 387 | 2e-037 |
| AT1G51270.2 structural molecule/ transmembrane receptor | 384 | 5e-037 |
| AT1G51270.3 structural molecule/ transmembrane receptor | 378 | 2e-036 |
| AT5G45200.1 disease resistance protein (TIR-NBS-LRR class), putative | 375 | 5e-036 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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