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Information for unigene UN18555

FASTA Sequence
Unigene ID: UN18555Length: 1827 SSR 
CATTAATTATTTTCAAAAGGATGAAACTAATAATAGTGTCTTTATTATTTCACTCAGTCATCAATTGTGAAATCTAAAATCTCAAT
GTTTAGATCTCTTTAGAGATAGAGAAAAACAAGAATGATGTAGGACTCATGAGTCTGATCAAAATCAAATTATTCAAGCTCATAAC
TGGACACATTGCATTTGCAAGATATGATTGTTAAACTGTTCAGAATAGTGAAAGGTCTCCAGCATCAACGGATCTCTTCACAAGCT
TAGCCCATGATTCATTTGTTTCATGGATGATCTTCAAAGCATAGTCTTTGTTTGCTGGTTTGTCTCCAAGACCAAACCTGTTAGCA
GGCTTTCCATCTGGGATCTTGTAGTCTCTAAACCAGTCTCTAATGGCTGTTAATGTACCCGGGAAATGTTTCTCAACATCATCAAC
ATCATTGACAAGATGAGCTTTTGGGTCATCCAAAGAAATGGCAACAATCTTCCAGTCTAGCTCTCCTTCCTCAATCATAGCTAAAG
CAGCCCAAGGCTTGATCTTTAGGACCTCGCCTATCTTCCTTTGAGCCTCCCCAATCTCAACAACATCATCAAAAGCTAAAGCTTAT
ACTTTCAACCGCCGAGAAAAAATGCCAGTCGACGAATCCTCGTCTGTCGGAAAAACCGTTTGCGTCACCGGAGCTGGTGGATACAT
AGCTTCTTGGATTGTGAAGTCACTCCTCGAGAGAGGCTACACCGTCAAAGGAACCGTACGGAATCCAGATGATCCAAAGAATACGC
ATTTGAGAGAGCTCGAAGGAGCCAAGGAAAGACTGATTCTGTGCAAAGCTGATCTTCAGGACTACGAGGCTCTTAAAGCGGCGATT
GATGGCTGCGACGGCGTCTTTCACACGGCTTCTCCGGTCACTGACGATCCTGAGCAAATGGTGGAGCCAGCGGTGAATGGAGCCAA
GTTCGTAATTAATGCGGCTGCTGAAGCCAAGGTCAAGCGCGTGGTCATCACCTCCTCAATTGGTGCCGTTTACATGGACCCGAACC
GTGACCCTGAAGCCATCGTTGACGAAAGTTGTTGGAGTGATCTTGAGTTCTGCAAAAACACCAAGAATTGGTATTGTTACGGCAAG
ATGGTGGCGGAGCAAGCCGCGTGGGAGACGGCGAAGGAGAAAGGTGTTGACCTGGTGGTTTTGAATCCCGTGCTGGTCCTTGGACC
GCCGTTACAGCCAACGATCAACGCCAGTCTCTTCCATGTCCTCAAGTATCTAACCGGCTCGGCTAAGACTTATGCTAATCTGACTC
AGGCTTACGTGGATGTTCGCGATGTCGCCCTGGCTCATGTACTGGTCTACGAGGCACCCTCGGCCTCTGGACGTTATCTCCTCGCC
GAGAGCGCTCTTCACCGCGGCGAAGTTGTTGAGATTCTGGCTAAGTTATTCCCGGAGTACCCACTTCCGACCAAGTGCAAGGACGA
GAAGAACCCAAGAGCCAAGCCGTACAAGTTCACTAACCAAAAGATTAAGGACTTAGGCTTAGAGTTCACATCCACCAAGCAAAGCC
TTTATGATACAGTCAAGAGCTTGCAAGAGAAAGGTCATCTTCCTCCTCCTCCTCCTTCTACATCACAAGAATCCAACCACAACGGC
ATCAAGATCGATTCTTGAATAGCTTATTCCCTGAAGTATCATCCTTAGCCATTGATATATGCTTTTTTTTTTCAAAAAAAACAAAC
AAACAAACAGATGTTTTTTGTTACTGTCTTTGTTTATGTGAAATATTTATTTCAAAATGTCTTTGTCTGGATTTTGATTCTGTCTT
AAAGCCTTCAATGCTTGCTTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890139 hypothetical protein ARALYDRAFT_471794 [Arabidopsis lyrata subsp. lyrata]17183e-189
NP_173047 cinnamoyl coa reductase 1 [Arabidopsis thaliana]17041e-187
ADC40029 cinnamoyl-CoA reductase [Isatis tinctoria]16987e-187
AAG46037 cinnamoyl CoA reductase isoform 1 [Arabidopsis thaliana]16942e-186
NP_001077544 cinnamoyl coa reductase 1 [Arabidopsis thaliana]15859e-174

Swiss-Prot top hits (Blast detail)Scoree value
Q9LXC9 Soluble inorganic pyrophosphatase 1, chloroplastic6096e-062
Q93Y52 Soluble inorganic pyrophosphatase 1, chloroplastic3802e-035
Q6FRB7 Inorganic pyrophosphatase3417e-031
P13998 Inorganic pyrophosphatase3311e-029
P00817 Inorganic pyrophosphatase3255e-029

TrEMBL top hits (Blast detail)Scoree value
Q9S9N9 Cinnamoyl CoA reductase 117041e-187
D3J7Z3 Cinnamoyl-CoA reductase16985e-187
Q9FPM0 Cinnamoyl CoA reductase isoform 116941e-186
A8MQW5 Uncharacterized protein At1g15950.215856e-174
C0Z2K0 AT1G15950 protein15784e-173

Arabidopsis top hits (Blast detail)Scoree value
AT1G15950.1 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase17054e-190
AT1G15950.2 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase15853e-176
AT1G80820.1 CCR2 (CINNAMOYL COA REDUCTASE); cinnamoyl-CoA reductase14492e-160
AT5G19440.1 cinnamyl-alcohol dehydrogenase, putative (CAD)8148e-087
AT1G51410.1 cinnamyl-alcohol dehydrogenase, putative (CAD)7512e-079

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
202  20%
 
61  10%
 
106  60%
 
91  10%

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