|
Information for unigene UN18555
FASTA Sequence |
Unigene ID: UN18555 | Length: 1827 |
SSR | | CATTAATTATTTTCAAAAGGATGAAACTAATAATAGTGTCTTTATTATTTCACTCAGTCATCAATTGTGAAATCTAAAATCTCAAT
GTTTAGATCTCTTTAGAGATAGAGAAAAACAAGAATGATGTAGGACTCATGAGTCTGATCAAAATCAAATTATTCAAGCTCATAAC
TGGACACATTGCATTTGCAAGATATGATTGTTAAACTGTTCAGAATAGTGAAAGGTCTCCAGCATCAACGGATCTCTTCACAAGCT
TAGCCCATGATTCATTTGTTTCATGGATGATCTTCAAAGCATAGTCTTTGTTTGCTGGTTTGTCTCCAAGACCAAACCTGTTAGCA
GGCTTTCCATCTGGGATCTTGTAGTCTCTAAACCAGTCTCTAATGGCTGTTAATGTACCCGGGAAATGTTTCTCAACATCATCAAC
ATCATTGACAAGATGAGCTTTTGGGTCATCCAAAGAAATGGCAACAATCTTCCAGTCTAGCTCTCCTTCCTCAATCATAGCTAAAG
CAGCCCAAGGCTTGATCTTTAGGACCTCGCCTATCTTCCTTTGAGCCTCCCCAATCTCAACAACATCATCAAAAGCTAAAGCTTAT
ACTTTCAACCGCCGAGAAAAAATGCCAGTCGACGAATCCTCGTCTGTCGGAAAAACCGTTTGCGTCACCGGAGCTGGTGGATACAT
AGCTTCTTGGATTGTGAAGTCACTCCTCGAGAGAGGCTACACCGTCAAAGGAACCGTACGGAATCCAGATGATCCAAAGAATACGC
ATTTGAGAGAGCTCGAAGGAGCCAAGGAAAGACTGATTCTGTGCAAAGCTGATCTTCAGGACTACGAGGCTCTTAAAGCGGCGATT
GATGGCTGCGACGGCGTCTTTCACACGGCTTCTCCGGTCACTGACGATCCTGAGCAAATGGTGGAGCCAGCGGTGAATGGAGCCAA
GTTCGTAATTAATGCGGCTGCTGAAGCCAAGGTCAAGCGCGTGGTCATCACCTCCTCAATTGGTGCCGTTTACATGGACCCGAACC
GTGACCCTGAAGCCATCGTTGACGAAAGTTGTTGGAGTGATCTTGAGTTCTGCAAAAACACCAAGAATTGGTATTGTTACGGCAAG
ATGGTGGCGGAGCAAGCCGCGTGGGAGACGGCGAAGGAGAAAGGTGTTGACCTGGTGGTTTTGAATCCCGTGCTGGTCCTTGGACC
GCCGTTACAGCCAACGATCAACGCCAGTCTCTTCCATGTCCTCAAGTATCTAACCGGCTCGGCTAAGACTTATGCTAATCTGACTC
AGGCTTACGTGGATGTTCGCGATGTCGCCCTGGCTCATGTACTGGTCTACGAGGCACCCTCGGCCTCTGGACGTTATCTCCTCGCC
GAGAGCGCTCTTCACCGCGGCGAAGTTGTTGAGATTCTGGCTAAGTTATTCCCGGAGTACCCACTTCCGACCAAGTGCAAGGACGA
GAAGAACCCAAGAGCCAAGCCGTACAAGTTCACTAACCAAAAGATTAAGGACTTAGGCTTAGAGTTCACATCCACCAAGCAAAGCC
TTTATGATACAGTCAAGAGCTTGCAAGAGAAAGGTCATCTTCCTCCTCCTCCTCCTTCTACATCACAAGAATCCAACCACAACGGC
ATCAAGATCGATTCTTGAATAGCTTATTCCCTGAAGTATCATCCTTAGCCATTGATATATGCTTTTTTTTTTCAAAAAAAACAAAC
AAACAAACAGATGTTTTTTGTTACTGTCTTTGTTTATGTGAAATATTTATTTCAAAATGTCTTTGTCTGGATTTTGATTCTGTCTT
AAAGCCTTCAATGCTTGCTTC
|
|
|
GenBank top hits (Blast detail) | Score | e value |
XP_002890139 hypothetical protein ARALYDRAFT_471794 [Arabidopsis lyrata subsp. lyrata] | 1718 | 3e-189 |
NP_173047 cinnamoyl coa reductase 1 [Arabidopsis thaliana] | 1704 | 1e-187 |
ADC40029 cinnamoyl-CoA reductase [Isatis tinctoria] | 1698 | 7e-187 |
AAG46037 cinnamoyl CoA reductase isoform 1 [Arabidopsis thaliana] | 1694 | 2e-186 |
NP_001077544 cinnamoyl coa reductase 1 [Arabidopsis thaliana] | 1585 | 9e-174 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9LXC9 Soluble inorganic pyrophosphatase 1, chloroplastic | 609 | 6e-062 |
Q93Y52 Soluble inorganic pyrophosphatase 1, chloroplastic | 380 | 2e-035 |
Q6FRB7 Inorganic pyrophosphatase | 341 | 7e-031 |
P13998 Inorganic pyrophosphatase | 331 | 1e-029 |
P00817 Inorganic pyrophosphatase | 325 | 5e-029 |
TrEMBL top hits (Blast detail) | Score | e value |
Q9S9N9 Cinnamoyl CoA reductase 1 | 1704 | 1e-187 |
D3J7Z3 Cinnamoyl-CoA reductase | 1698 | 5e-187 |
Q9FPM0 Cinnamoyl CoA reductase isoform 1 | 1694 | 1e-186 |
A8MQW5 Uncharacterized protein At1g15950.2 | 1585 | 6e-174 |
C0Z2K0 AT1G15950 protein | 1578 | 4e-173 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G15950.1 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | 1705 | 4e-190 |
AT1G15950.2 CCR1 (CINNAMOYL COA REDUCTASE 1); cinnamoyl-CoA reductase | 1585 | 3e-176 |
AT1G80820.1 CCR2 (CINNAMOYL COA REDUCTASE); cinnamoyl-CoA reductase | 1449 | 2e-160 |
AT5G19440.1 cinnamyl-alcohol dehydrogenase, putative (CAD) | 814 | 8e-087 |
AT1G51410.1 cinnamyl-alcohol dehydrogenase, putative (CAD) | 751 | 2e-079 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|