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Information for unigene UN18560

FASTA Sequence
Unigene ID: UN18560Length: 1648 SSR 
TTCCTCTCTTCCTCTCCTCGTCGTCTTCACGATTCCACGACGATTCATCTCCGACCACCACCGATTATCGGTTTCACTTCTGATTC
CACAGATCCCCTCGAACTCTCAACTCATCTCCCCTCTCAAATTCTCGATCTTTCCCCTCTAATTCGAAACCCTAATCTCGCCTACC
AATTCCAATTCCGCACAAAGATCTAGTCTTTACCGATGGACGCGACTAGGGTTTGCTCGGAGGTTCCCGGATCTTCGAAATCAACC
TCTCTCACGGAGTCGACCTCTCGCACGGAGACCATCAACGGCTCACACGAGTTCAAGATCAGCGGCTACTCTCTCGCCAAAGGGAT
GGGGATAGGCAAGTACGTGGCTTCGGATACGTTCATGGTCGGTGGGTACTCGTGGGCGATCTACTTCTACCCGGATGGGAAGAGTC
CCGAGGATAACTCTGTCTACGTGTCTCTCTTCATAGCGCTCGCGAGCGAAGGAGCTGATGTTAGGGCTTTGTTTGAGCTGACACTT
GTTGATCAGAGTGGTCATGAGAGGCATAAGGTTCATAGCCATTTCGGTAGGACTCTTGAGAGCGGACCTTATACTCTTAAGTACCG
AGGAAGTATGTGGGGATACAAGCGGTTTTTCAAGAGGACTCTTCTGGAGTCATCAGATTATCTCAAGGACAATTGCCTCTTGGTGC
GGTGCTGTGTGGGCGTGGTGAAGTCACAAACAGAGGGACCGAGGAGTTACAATATCCCTGTGCCGGTTTCTGACTTGGGGCATCAG
TTTGGAAAGCTTTTGGAGAGTGGGAAGGGAGTTGATGTTACATTCCGAGTTGATGGAGAGACGTTTCCTGCTCACACGTTGGTTCT
TGCAGCTCGTTCTCCAGTTTTCAGGGCACAGCTTTTTGGCCCGTTGAAAAACCAAAACACCAAAAGCATAATCATAGAAGACATGG
AAGCTCCCATTTTCAAGATGTTCCTCCATTTTATCTACTGGGACGAGTTGCCTGATATGGAAGACATAATGGGCACAGACTTGACC
CTTGTGGCTCAGCATCTGCTTGCAGCTGCAGACCGTTATGCTCTGGAGCGGCTTAGAACCATCTGCGAGTCAAAACTCTGTGAAGG
AATCAGCATAAACACAGTAGCGACCACCTTGGCTTTGGCAGAGCAGCATCATTGTTTCCAGCTAAAAGCTGCGTGTCTTAAATTCA
TAGCATTGCCACAAAACCTGAAAGCTGTGATGGAAACGGATGGGTTTGATTATCTGAAGGAAAGCTGCCCATGCTTACTAAGTGAG
CTGCTGGAGTATGTGGCTAGGCTGAGTGAGCACTCTTTAACATCATCGGGGAATAGGAAGGAGTTATATGCTGGTGGTGGTGACGT
GAATGGGAGACGAGTGAAGCAGCGGTTGCACTAAGTAACTCGCTTTCAGGGAGAGAGAGAGAGAGAGACTGATCACGTTGGAGGAG
GCATCTTTGGGTAAACAGAATTGTAGAAGAGTCGAGATTTGTTGTGCATTTGTCATTTGTAAAAGGATTAGTGATTGTTCCGTGTT
GTCTAGCCAAGTAGAGTGACATGTTTTTTTTTGTATTTTTGTGCTTTTTTGATTGTATTGACTAGAGCCGCTTCTCTCAAGGAAAA
GTTTCATGAAACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884563 ATBPM2 [Arabidopsis lyrata subsp. lyrata]18814e-208
NP_566275 BTB/POZ and M2 domain-containing protein [Arabidopsis thaliana]18752e-207
XP_002871853 BTB-POZ and math domain 1 [Arabidopsis lyrata subsp. lyrata]17004e-187
NP_197401 BTB-POZ and math domain-containing protein [Arabidopsis thaliana]16905e-186
XP_002516797 Speckle-type POZ protein, putative [Ricinus communis]15661e-171

Swiss-Prot top hits (Blast detail)Scoree value
Q5BL35 Speckle-type POZ protein-like A2663e-022
Q7T330 Speckle-type POZ protein2629e-022
Q6IQ16 Speckle-type POZ protein-like2611e-021
A0JMG1 Speckle-type POZ protein-like B2583e-021
Q2M2N2 Speckle-type POZ protein-like2583e-021

TrEMBL top hits (Blast detail)Scoree value
Q9M8J9 F28L1.13 protein18751e-207
Q8L765 Putative uncharacterized protein At5g1900016904e-186
B9RSS8 Speckle-type POZ protein, putative15669e-172
B9SFP2 Speckle-type POZ protein, putative15174e-166
B9HY81 Predicted protein15022e-164

Arabidopsis top hits (Blast detail)Scoree value
AT3G06190.1 BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding18765e-210
AT5G19000.1 ATBPM1 (BTB-POZ and MATH domain 1); protein binding16911e-188
AT2G39760.1 BPM3; protein binding11661e-127
AT3G06190.2 BPM2 (BTB-POZ AND MATH DOMAIN 2); protein binding11401e-124
AT3G03740.1 ATBPM4 (BTB-POZ and MATH domain 4); protein binding10933e-119

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  17%
 
101  17%
 
111  17%
 
63  50%

Unigene MembersMember information