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Information for unigene UN18570
| FASTA Sequence |
| Unigene ID: UN18570 | Length: 877 |
| SNP | CTCGCTCTATATTTAAACACCATACTTCTCATGAAAACCAGGAGCACCCAAAAGACAATAAAATCTCGACAAAAAAGGATGAGTTC
ATCATCCTTTTTACGAGTAATATTGCTCTTAGGTGCTATTAATCTTTTCGTAACAATATCAACAACCAAAGCTGCAACACTCGGTC
AAGTATTTGAAATCTGTAGGAGTTTATGCCCGGGATGTGACTACGACTCGTTACAGTTCTTGTTCCGACACAACTTGGTCCGTGCC
GCAAGATTCGAACCTCCTTTGATATGGGATCAAACACTCGAGAACTACGCTCAAAACTGGGCTAATCAAAGAAAGTCAGATTGTGC
TTTGCAACACTCTTTCCAAGACGGAGAGTTTACTCTCGGCGAGAATATTTTCTGGGGATACGGAGCCAACTGGTCTCCGGCTGACG
CTGTGGTCGCGTGGGCCAGCGAGAAGAGGTTTTATCATTATGGCTCCAACTCGTGCGACGCTGGACAGATGTGTGGGCATTACACA
CAGCTCGTGTGGAAGAACACGAGGAGGATTGGGTGCGCACGTGTAGTGTGCGACAACGGTGGGATCTTCATGACTTGTAACTATGA
TCCTCCCGGTAACTACATCGGCCAGAAACCCTATTGATCGATCATTCATCTTATTTTTAGAAGTTCTTATGACTTTTTAAAGGAAG
TTAGATGGATGTATTTTGTATTTTACTAGAAATAGAAGTGTTTGTGGGGTTTGTGATATTGAATACGTTTGTATCGCTATACATGA
TTTTGTTCACGTCAAGGTTGTAATTGCATTTCGGTTGTTTATATCTTTATATATAGCCGTTAGAATGACCAATATATGTTTCATCT
CTGATGGATTTCAATCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002869656 hypothetical protein ARALYDRAFT_492242 [Arabidopsis lyrata subsp. lyrata] | 897 | 2e-094 |
| NP_194308 putative pathogenesis-related protein [Arabidopsis thaliana] | 895 | 3e-094 |
| XP_002532412 STS14 protein precursor, putative [Ricinus communis] | 614 | 1e-061 |
| XP_002325075 predicted protein [Populus trichocarpa] | 600 | 5e-060 |
| XP_002276867 PREDICTED: hypothetical protein [Vitis vinifera] | 586 | 2e-058 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q40374 Pathogenesis-related protein PR-1 | 459 | 5e-045 |
| P35793 Pathogenesis-related protein PRB1-3 | 407 | 6e-039 |
| P35792 Pathogenesis-related protein PRB1-2 | 406 | 7e-039 |
| Q05968 Pathogenesis-related protein 1 | 405 | 1e-038 |
| P09042 Pathogenesis-related protein 1C | 384 | 3e-036 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SW05 Putative pathogenesis-related protein | 895 | 2e-094 |
| B9T2E3 STS14 protein, putative | 614 | 9e-062 |
| B9IM28 Predicted protein | 600 | 4e-060 |
| A5C0Z4 Putative uncharacterized protein | 586 | 2e-058 |
| Q0DWY7 Os02g0786900 protein | 515 | 3e-050 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G25780.1 pathogenesis-related protein, putative | 896 | 1e-096 |
| AT5G57625.1 allergen V5/Tpx-1-related family protein | 460 | 4e-046 |
| AT4G30320.1 allergen V5/Tpx-1-related family protein | 440 | 8e-044 |
| AT4G25790.1 allergen V5/Tpx-1-related family protein | 436 | 2e-043 |
| AT1G01310.1 allergen V5/Tpx-1-related family protein | 411 | 2e-040 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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