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Information for unigene UN18574
FASTA Sequence |
Unigene ID: UN18574 | Length: 1763 |
SSR | | GGATCACAGAAACAAGGACTGCTTATCAACAACAAAGAAAAAAACATGGCGGAGGAATCAATCACCACCACCACCACCACCACCAC
TCTTGCTCCGCCGGAAAATCAACCACCGCCGGAGCTAACAACTCCGGAAGAATCGAAGCCTACTCTGGCAAAAGAGACTGAATCTC
CAGAGAAAGCATCTGAGACTGAACCGGCGGTTACCACCTCCACGCCGGAGACGGAAACCGCGGCGGCGAATCCCGACGTGTCGCCG
GAAGAGCATCAACCGCCGAAGGTGACGGAAACGGAAACGGCGTCGACGGAGAAAAAGGAGCTCGGAGACGAAACGCCGCCGCAGAA
GGAAGAAGAGACGGCGAGGATCCCGGAGAATCTCGGCTCGTTCAAAGAAGAGAGCAGCGACCTCTCCGATCTATCGGATTCGAGAA
GAAATCTCTCAACGAGCTGAAGCATCTCGTCCGAGACGCTCTCGACAACCACCAGTTCGGTTCAGTCGCTAAACCGGAAGAAACCG
CCGGCAACGCACCGGAAGAAGTCACGATCTGGGGAGTCCCGCTCCTCGAAGACGATCGAAGCGACGTCGTTTTGCTGAAGTTCCTG
CGAGCTAGGGACTTCAAGGTGAAAGACTCGTTGACCATGCTCAAGAACACGGTCAAGTGGAGGAGGGAGTTCAGATCGACGAGCTG
GTCGATGAAGACCTCGTGGATGATCTTGACAAGGTCGTGTTCATGCACGGACACGACAGGGAAGGCCACCCGGTGTGTTACAATGT
CTACGGTGAGTTCCAGAACAAGGAGCTTTACAACAAGACGTTCTCCGATGAGGAGAAGAGGAAGCATTTCTTGAGGACGAGGATTC
AGTTCTTGGAGAGGAGTATAAGGAAGCTTGACTTCAGCTCCGGCGGTGTTTCCACCATTTTTCAGATTAACGATATGAAGAACTCT
CCCGGGTTGGGGAAGAAAGAGCTTAGATCCGCCACCAAGCAAGCCGTGCAGCTGCTTCAGGACAACTACCCTGAGTTTGTGTTCAA
ACAGGCCTTCATCAATGTTCCTTGGTGGTACCTTGTGTTTTACACTGTGATTGGTCCGTTTATGACACCAAGGTCAAAGAGCAAGT
TGGTGTTTGCTGGTCCTTCGAGATCAGCCGAAACCCTTTTCAAATACATATCACCAGAACAAGTCCCTGTGCAATACGGAGGATTG
AGTGTAGATCCTTGCGACTGCAACCCAGACTTCTCATTGGATGATCCAGCCTCTGAAGTCATTGTTAAGCCCGGAACAAAGCAAAC
TGTGGAGATCATAATCTATGAGAAATGTGAGATTGTGTGGGAGATAAGGGTGATTGGATGGGAAGTGAGTTACTAGGCAGAGTTTG
TGCCAGAAGAGAAAGATGCTTATACGGTGGTGGTTCAGAAACCGAGGAAGATGAAACCAGCCGATGAACCGGTGTTAACCCAAAGC
TTCAAAGTGAATGAGCTTGGCAAGGTTTTACTCACAGTGGACAACCCAACCTCTAAGAAGAAGAAGCTTGTTTACAGGTTTAATGT
CAAACCCCTCTGAGATTTACAAAGAAATGAAAGTCTTTTAAACCTTTTTATAAAAGTTTTACAAACAATGTGGTTTCTGGTATGCT
TGTGTTTGTATATGTGAGAATATGTACTTTTTCATATTATTATCATTTTGTGTGGTTTATACGATGGAGCTTTCTACATCTTTTGT
TCTTTGGGGAGAATATGTTTTACATAACTTTATGTAATAAAAA
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GenBank top hits (Blast detail) | Score | e value |
XP_002888860 SEC14 cytosolic factor family protein [Arabidopsis lyrata subsp. lyrata] | 1498 | 1e-163 |
NP_177361 patellin-3 [Arabidopsis thaliana] | 1497 | 1e-163 |
AAK82462 At1g72160/T9N14_8 [Arabidopsis thaliana] | 1497 | 1e-163 |
XP_002521798 Patellin-5, putative [Ricinus communis] | 1283 | 9e-139 |
XP_002327362 predicted protein [Populus trichocarpa] | 1273 | 1e-137 |
TrEMBL top hits (Blast detail) | Score | e value |
B9S729 Patellin-5, putative | 1283 | 6e-139 |
B9MWE2 Predicted protein (Fragment) | 1273 | 9e-138 |
B9IQE9 Predicted protein | 1268 | 3e-137 |
B7FL90 Putative uncharacterized protein | 1215 | 5e-131 |
A5ASS0 Putative uncharacterized protein | 1194 | 1e-128 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT1G72160.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 1498 | 4e-166 |
AT4G09160.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 1201 | 1e-131 |
AT1G22530.1 PATL2 (PATELLIN 2); transporter | 752 | 1e-079 |
AT1G72150.1 PATL1 (PATELLIN 1); transporter | 748 | 4e-079 |
AT3G51670.1 SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein | 695 | 5e-073 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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