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Information for unigene UN18575
| FASTA Sequence |
| Unigene ID: UN18575 | Length: 1044 |
SSR | | GGGTCTTCTCCATCACACTCCTCGTGCCTTCCTCCTCCAATGGAGTCACTCCTGCACGCGTCTTCGTCTCTACTATCTCTCAGGCC
CAGAATAGACGGCCGAGATTCGTTCATCAACTCTCCCCGCGTGTGCCTCATACCTAGTCTCGCCCCCAGAGGATCAAAGTCTCTTC
CTTTGGTCGTCGCCGCCGCTAAGAAGAAGAAAAGCAAGAAAGACGACAGCCACAGCTTCTCCGCTAGACCTGACGAAGCCACCGGC
CCGTTTCCTGAATCCATTCTTCTCAAAGAGAAGAAGATTGATGAGGAAGGTGATCTTCTTCCTGAGTTCGCTGATGATGAAGAAAA
GGAGCTATACGAGTTTCTTGATCTTCAGCTTCAGAGTGACTTGAATGAAGAAAGGATGAGGCACTATGAGGTGGTTTACTTGATTC
ATGAGAAACATGCAGAGGAGGTTGAAAGCGTCAATGAGAAAGTTCAAGAGTTCTTGAAGGAGAAGAAGGGGAAAGTGTGGAGGTTT
AGTGACTGGGGGATGCGTAGACTGGCGTATAAGATACAGAAGGCAGAGAACGCACACTATATACTGATGAACTTTGAGATGGAAGC
GAAACACTTGAACGAGTTCAAAGGAATGTTGGATAGTGATGAGAGGGTGATCAGGCATCTCGTGATGAAACGTGATGAGGCCATTA
CGGAAGACTGCCCTCCCCCTCCCGAGTTTCACTCTGTTCGTGCAAGTATGGACGGGGATGATGACTTTTATGATGATGATGATGAG
GAAGAAGAAGAAGAAGAGTTTGATGAAGAGGAAGAAGGTGATGATGTAGAGTATGAAGTAGATGATGATGGTAATGTTGTTATGGT
GGTGTATGAAGATGATGAAGAAGAACAAGGACAGGACCAGTCAAATAAAGCCACAAGAGGAAAAAACCGAACAACAGTTAACGTTT
GATGAGGTTTAGAGAGGTGTTTTGTAGAGATCTTCAGTGTTTTGGGACATGGAATTTGTATAAACAATATCACATCACTAAAAGTA
CTTTTCTTTTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002885189 hypothetical protein ARALYDRAFT_318480 [Arabidopsis lyrata subsp. lyrata] | 1270 | 1e-137 |
| NP_566568 Translation elongation factor EF1B/ribosomal protein S6 family protein [Arabidopsis thaliana] | 1262 | 1e-136 |
| BAA94995 unnamed protein product [Arabidopsis thaliana] | 1258 | 4e-136 |
| AAM62870 unknown [Arabidopsis thaliana] | 1256 | 6e-136 |
| XP_002273724 PREDICTED: hypothetical protein [Vitis vinifera] | 835 | 4e-087 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q0VMF9 30S ribosomal protein S6 | 245 | 4e-020 |
| A6VD48 30S ribosomal protein S6 | 245 | 4e-020 |
| B7V1Z8 30S ribosomal protein S6 | 245 | 4e-020 |
| Q02F83 30S ribosomal protein S6 | 245 | 4e-020 |
| Q9HUM9 30S ribosomal protein S6 | 245 | 4e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q948R9 AT3g17170/K14A17_29 | 1262 | 8e-137 |
| Q9LSN0 Genomic DNA, chromosome 3, TAC clone:K14A17 | 1258 | 2e-136 |
| Q8LE34 Putative uncharacterized protein | 1256 | 4e-136 |
| B9HIK6 Predicted protein | 796 | 9e-083 |
| A2Q664 Ribosomal protein S6 | 776 | 2e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G17170.1 RFC3 (REGULATOR OF FATTY-ACID COMPOSITION 3); structural constituent of ribosome | 1267 | 1e-139 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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