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Information for unigene UN18577

FASTA Sequence
Unigene ID: UN18577Length: 1742 SSR 
GCTTCAAGTCATGTGTCAAATATAGTAATAATAATCATACACTTCAGTAACTGCATCATGAAACAAAGGTTATACGAGAAAACTAT
AAAAATCTAATACAAAGGTTATACACAAACCCCCAACTATGATGATTCATCCCTATTGACAAATAATTTAAAGAAGAGAAAAACAA
AAATCAAAACCTAGAATAATATCACAATAATACCTTAAGCAAATTTATAACTGGAAAAATATTCAAATCTCTCATACTACTAATAC
TCACCACACACATTCCAGAAGGTTAAACTCATAATCAAATATCAACCTAACTGGTTATTGTCTTATTCCTCTTCTTCTTGTTTCAT
CCAATTCCAATTCCAATTCATACACCACTCGGCATCGTCTTTAACTCATGCAATGTAGCTCTAATCTGCTCTTGAACCAGCTCTAA
TCTCCTCGAATACACTTCCAGCTCCAGTATCTGTTGCTTCCTCCACCGCTCATCATTCACCGCCTTGTTCCCACCTCCTCCTTCCA
CACCATAACCTAACGGCCGTGTAAACACTGGGCTTAACGAGCCAAAACCATGACCATGACCACCACCAACACCACCTCCTCCTCCC
ATTGCAGCCATCATCATACTCGTCGTCCCGTTCATCATCTCCTTGATCAGAGGAGAGACACAGCTCTTCACAGTCTCTTCAATCAA
AACACCGATGTTCCCTCCGATAACAGCGGTCGCAGGTTCGTTGAGGTTAACATTGCTAGCTGCTGCTGTGTTTGGTATGTTCCCAT
CAATGACAGGTTTGCTGTCTTCCTCAATCTTCCCTATTCTCGATCTCGACCGTTTCCTCGATCCGCTACTCATAGTCAACCTCCTC
TCAACTCCGTTCTCAGAATCAACCTCAATAGGATTCGAACCACCAGGGCTGTTAAAGTAGTTACCGTTGGTGGTGTTAGCGTTGGT
CTCCTCGAAATCCATGACATTATTGTCCTCGAACCCGATGATCTTCCCAGTCTGGTTCCAAATCTTCCTAGAGATCTCGAAAGTTG
ACTGATCGTGAGGGCTCTTGAAGAAGACCTCTTTCCCGGAGCTAATCTTGCTCATCACGTTACGGTACTTCTTCTTGAGACGCCTC
AGCTTCTCCACGAGCTGGTTCTTGTTGAACTCCAGCTGGAGCTTGGACTTGATCAGCTCGTAGAACGGGGCCGTGTCGGGCGGGTG
GGAGCTGTTGCTCCCCCTGTGTGACGTCACGTAGTCGAGGAACCCGCGGAGGAGCTCGATCTCGTCCTCGTCGGTCCACAGCCTCT
GGAAGAGGCGTCTGGAGTCGTCGATCGGCGGCGGAAGCATCCTCTGGTTGTTGTGGTGGTGGTGGTGGACGATCTCCGTCGTGCGG
TGCCATTTCGGATCGGAGTCGACGGGGATCACGGAGACGGGGACGGCGGATCCGGCGGGAAGCGCGACGGTTACGGCGTCTGTGGA
GGAGGAGGCGACGACGGCGGCGGTGGTTGGATCTTCCTCGTCGGGATCGTCGTCTTCGGGATCTTCGTTGGTCTCGGGGATCGCGG
CGTCGTGGAGATCCTCGTCGGTGTCGGAGTCTCCTCCTCCTCCGTCTCCTGCGCCTCCTTCCTCTAGATCCGGCGATTCGATGGAG
AAAACGGCGTCGCGTTGATCAGATGTCATGTTTCGGAGAAGGGAAAGGAAAAACAGATCTGGCTTCAGCTCTTGCGATCAGGTTAA
GACCAAAGAGAACCAGATGCGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002882384 transcription regulator [Arabidopsis lyrata subsp. lyrata]16611e-182
NP_187144 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]16314e-179
NP_001189809 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]13492e-146
AAL47486 AT3g04930/T9J14_12 [Arabidopsis thaliana]13242e-143
NP_198156 DNA-binding storekeeper protein-related transcriptional regulator [Arabidopsis thaliana]11979e-129

Swiss-Prot top hits (Blast detail)Scoree value
P80001 Spermatid-specific protein T11428e-008
P21997 Sulfated surface glycoprotein 1851392e-007
P0C230 Protamine1382e-007
Q02817 Mucin-21373e-007
Q9C6S1 Formin-like protein 141355e-007

TrEMBL top hits (Blast detail)Scoree value
Q9CAV7 Putative uncharacterized protein At3g0493016313e-179
Q8VYQ3 AT3g04930/T9J14_1213241e-143
Q8GXW7 At5g2804011913e-128
B9GF32 Predicted protein6232e-062
B9HNT9 Predicted protein6205e-062

Arabidopsis top hits (Blast detail)Scoree value
AT3G04930.1 transcription regulator16321e-181
AT5G28040.1 transcription regulator13542e-149
AT1G11510.1 DNA-binding storekeeper protein-related2198e-018
AT5G14280.1 DNA-binding storekeeper protein-related1525e-010
AT1G31810.1 actin binding1354e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  29%
 
201  14%
 
92  29%
 
211  14%
 
181  14%

Unigene MembersMember information