Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN18590

FASTA Sequence
Unigene ID: UN18590Length: 2196 SSR 
GGTGTAGAATGATACATTTTACATTCTAATATCTTACAAATAAAATACAAATATACAGTGAATGTAGGCCTTCTTTACAATCACGG
AAAAATACATGAAAATGGCTAATTAAGTATTAGAAAAACTAAAATACTAATCACAGAATATCTTTGTCGATGAGCATAACATCATT
TATTGCATTTAATAATCTTAAATAAAAATATAAACATTTCAATCTACATATGACTTATCTCGTCGGGCTGACCAGTAAGTGAAATT
TGTATTTCTTCAAGTGACAATCCTTTCGTTTCCGGAACGAGCAACCAAATAAAAAGCAACGCTCCTCCTCCGATAGCCCCAAATAT
GTAAAATGTCCCTTGAGTGCTCCATTCGAATAGAAAGTTGAAAGCGTAAGTGACGATGGAACTACTTGACCATGAGGCTAACGTAA
CTAAACTCCCTGCTGTTACTTTTATATTTATTGGAAATATCTCTGACATAATTACCCAAGGGAGGCCTCCCACGCCTATTGCATAA
GTTGCAATATACAGCGTAACGCATATAAACGTGAATACTGGAGTTAGTTCTGGAAGTAATTGCATTTTCTGTAATGCGAAAACGAT
CCCAAGAAGCATGCAAGTTATGCTCATCCCACACGCAGAAGTCAACAAGAGGGGCCGTCTGCCCCATTTATCTACAAGAATTAGAC
CAATCATGGCTTTTGGTATCATGAATAGGCTAACATCGTAGATCCAATGGCCACCGAAAAACCAGCTTTTCTAAAAATGGTACTTG
CATAAGAGATTACAGCAGCACTTCCTGAGAACTGCTGTATCAACATTAGTCCGACCCCTACCACGAGAGTATGTCTATACTTTTTC
TGGAACAAATCAGAAAAGCTCGACTTTGAATCACTTGCTACAATTCTGGTCATAACTTGAATCTCTGAAGCTTCGTGTGAAATATC
AGCATCTCTCCCTCTAAGCCGAAGCAGTGAATTTTCTAGTTCTTTTTCCGTACCAACTTTTGCCAGCCATCTTGGGGATTCTGGTA
CAAAGAATAAACCGACTGCTTGAATGGCGCATGGTAAACCACCTAGTAAAGCCATCATCCCCCAGTTCAAGAAATTCCCGCCAAAA
TAAACCATGGCGACTCCAGCGTTTTGAAGAAGCTGATTAGAAAAGGTAAATGTACCGCGAACATGTTTTGGCGCAATTTCGGCTAT
GTAGACAGGTACCACATAGCTAATCAAGCCAATTCCAATCCCTGATGATAATCTTCCAAAGTCCAGCCACAACACATCCTTAGCGA
AAGCGATGGACAGCCAACCAGTGATGCAGAGGATATTGGACACCCACATTGTTCCTCTTCTTCCTAGCATGATCGCCATTTTACCG
CTGAACAGCGCACCGACTGCAGCTCCCAACGTGGAGAATGAGCCAAATGCTGAAAATTCTGCTATAGAAAGGCCCATATCTTGCAT
AATTCCTATCTCGGCACCTGAGGTATAACCAACAGCAACACCAAAGGAGAAGGAGGCACATACGGCAACGAAAGTGCTGAGGATAA
CACAGGCAGTAATACGACAGTCTGAAGCATCGTTTTGGTTCTTCAGCTTGAGAAGCCCTTCCTCCATACTTCTTTCTTCTTCGACC
ACCGTCATAAACACATGCAGTATGTATGTGTATGACAGAATTTCTGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGAGAAT
CAAGCTTTCGTGTAGTATTCGTACAGAGAGAGAGAGAGAGAATGGCGGAGAGCGGTGGACGGAGGATAGGAGCGGCGGTGGATTTC
TCGGAGTGCAGCAAGAAGGCTCTGAACTGGGCGATCGAGAACTTGGTTCGCGACGGAGATTATCTAATCCTCATCACCGTGGCCCC
CAACATGAATTACGAGGAAGGCGAGATGCAGCTCTGGGAGACCGTCGGATCACCGTTGATTCCACTGAGTGAGGTATCTGAAGCTT
CCGTGATGAAGAAGTATGGAGTGAAGCCAGATATTGAAACCCTTGACATTGCCAACACTGCCGCTAGGCAGAAGTCGATTACAGTA
GTGATGAAGATATACTGGGGAGATCCTCGTGAGAAGATTTGTGAAGCTGTTGACCATATCCCTCTCTCTAGCCTTGTCATCGGTAA
CCGTGGCCTTGGCGGCCTTTTTTTTTTTTTTTTTTGATCAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874379 sugar-porter family protein 1 [Arabidopsis lyrata subsp. lyrata]13215e-143
NP_568494 sugar transporter ERD6-like 18 [Arabidopsis thaliana]13028e-141
AAK11720 sugar-porter family protein 1 [Arabidopsis thaliana]13011e-140
NP_568493 sugar transporter ERD6-like 17 [Arabidopsis thaliana]12946e-140
XP_002874378 predicted protein [Arabidopsis lyrata subsp. lyrata]11631e-124

Swiss-Prot top hits (Blast detail)Scoree value
Q94CI6 Sugar transporter ERD6-like 1813023e-142
Q94CI7 Sugar transporter ERD6-like 1712943e-141
Q94AF9 Sugar transporter ERD6-like 1110863e-117
Q93Z80 Sugar transporter ERD6-like 1010443e-112
Q94KE0 Sugar transporter ERD6-like 39206e-098

TrEMBL top hits (Blast detail)Scoree value
B9DGB5 AT3G05165 protein10866e-116
Q0WQ04 Sugar transporter like protein (Fragment)10866e-116
Q8RWK4 Putative sugar transporter (Fragment)10857e-116
A8MR75 Uncharacterized protein At1g08920.39201e-096
B1GXJ7 Hexose transporter-like protein9201e-096

Arabidopsis top hits (Blast detail)Scoree value
AT5G27360.1 SFP2; carbohydrate transmembrane transporter/ sugar:hydrogen symporter13023e-143
AT5G27350.1 SFP1; carbohydrate transmembrane transporter/ sugar:hydrogen symporter12942e-142
AT3G05165.1 sugar transporter, putative10863e-118
AT3G05165.2 sugar transporter, putative10863e-118
AT3G05165.3 sugar transporter, putative10863e-118

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  40%
 
62  40%
 
101  20%

Unigene MembersMember information