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Information for unigene UN18607
| FASTA Sequence |
| Unigene ID: UN18607 | Length: 1271 |
SSR | | CATCAGTTTTTATACACAACAGGACTGTGTACTAGTAGTAGTATAAATACAATATATATAGAGAGAGATGGATGATTGACAAAAAA
AAAAGAGAGAGAGATGGATTGTTTATGACAAAGACCACACCAATCCAACTCCAATGTCTCAACAAAAATTCGGAAAAAATAATCAC
GCAGCTCTCAAGAATATTCAGAGCCAAGGGAGAGAGAGGGAGAGAGAGATTAGGGGCCACGAGGTTTGAAGAAACAGAGGCACCCC
TGAAACTTGTCCGGTGGTATCATTCCCCCGCCTTTGCTTGTGTTTACCGCTTCAAGCAGCTTCACTACCTCCTCCATCTCCGGTCG
CTTGTCTGGATTCGGGTCCCAGCATCTCCTCATTATGTTTGCCACCGACTGTGGGCAGCATTTCGGAATCTCTGGTCTCAGATTCT
TATGAACAACGGCATGAGAGATCTCAGCAAAACTACAGTCAGCGTAGGGCATGTCGCAGCAGTATATTTCCCAGAGGCATACACCA
AAGCTATACACATCGCATTTCCTGTTGTAAGCCTTTCCTTCTAGAACCTCGGGTGCCATGTAGCCGAGAGTTCCAGTTTCACCGGT
CATGTCTTGAGGGTTCTGAGCCTCGACTCTAGCGACTCCGAAATCAGCAATCTTGAGGGTCTTGTTAGGTTCAAGTAACATGTTCT
CTGACTTGACGTCCCGATGTACAATCACCTTGGAGTGGAGGTAACTCAGCCCTCTAGCGAGATCCAAAGCGAGCTGAATGACATCC
TTGATGGGGAGTTTGGTGCGATATTTCTTGATGAGGAACTTCTTGAGGGTGCCACCAGCAACATACTCAACGACAACACAACAGGC
CTTGGCAGGGTGCGCAGAGTTGCCATGACCAACAGAATCACTAGAAGAAGGGATCTTCAGATCAGAGGTTCCCATGGGTGCCCCTA
TAAACTTGGTAACGTTGGGATGATGGAGCTTCTGCCAGACGGCGACCTCTTGTTCGAAGGAAATGCGGAGATCATCTGCTGTTGAG
ACACCATCTTCTCCCCAATCTAATACCTTCACAGCGACTTGTTGACCGGCGTAGACACCGCGGTAGGCAGTGCCATAAGTGCCGCG
AGCGAGGACCTGATTCATATCGAGCTTGGAGAGGTCGATCTCCCATTCCTGCATCGGACTCTTCCTTGACTTCACGGCGGCAGAGG
CGGAGGAGGAGGAGGATTGACCGCCCATATTCAAATCCCATTTTTTGAAATCTAGAGTATCCGCCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ33752 unnamed protein product [Thellungiella halophila] | 1587 | 3e-174 |
| XP_002878508 hypothetical protein ARALYDRAFT_486830 [Arabidopsis lyrata subsp. lyrata] | 1574 | 1e-172 |
| NP_191885 protein kinase family protein [Arabidopsis thaliana] | 1572 | 2e-172 |
| ABK06454 flag-tagged protein kinase domain of putative mitogen-activated protein kinase kinase kinase [synthetic construct] | 1572 | 2e-172 |
| AAM63482 ATMRK1 [Arabidopsis thaliana] | 1565 | 1e-171 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q2MHE4 Serine/threonine-protein kinase HT1 | 429 | 3e-041 |
| Q66L42 Mitogen-activated protein kinase kinase kinase 10 | 405 | 2e-038 |
| Q3U1V8 Mitogen-activated protein kinase kinase kinase 9 | 401 | 5e-038 |
| P80192 Mitogen-activated protein kinase kinase kinase 9 | 398 | 1e-037 |
| Q7T2V3 Mitogen-activated protein kinase kinase kinase 10 | 396 | 2e-037 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G63260.1 ATMRK1; kinase/ protein serine/threonine/tyrosine kinase | 1588 | 1e-176 |
| AT3G63260.2 ATMRK1; kinase/ protein serine/threonine/tyrosine kinase | 1233 | 1e-135 |
| AT3G22750.1 protein kinase, putative | 1229 | 4e-135 |
| AT3G01490.1 protein kinase, putative | 1188 | 2e-130 |
| AT5G50000.1 protein kinase, putative | 1160 | 4e-127 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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