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Information for unigene UN18619

FASTA Sequence
Unigene ID: UN18619Length: 1629 SSR 
AAGGAGGTGATGTTTTCTTTATATAGAAACTGTGTATCCCAATGCTATCCACTCACTGTCTTATTCACAAGATACCATGCTAATGA
TGGTTCATAATAAAACTCATGCATACAAATAATCCCATTTAAAAAATAACAACATCAAACAGAAGCCTGAATCTTCTTTTTCATCT
TTGGGTTGTGTCTACTAATAAATATATGGCATCACATAACCGAACTACGTACTATGTTGTAATTGAACAAAAAGTTGCTTTCTAAT
ACTGTCCCCTCTCCTGTATAACCCAAGTTTAACCCCTAAACACTGCTTCAAATCCCCATCCAATCCAGCTCCCAAATTCACTCCAT
ATGTTTTGTTCTTTCTACGTGAAACGCTCTCTTCCGCTATCGTCACCTGCATTGCTTTTGCGTTTGTTCTTCAAGACACTGGAAGA
AGATGGATTGCTATGCCAGTTTCTCTTTCTCTGATTAATGAACCAATTGTTTATCTGCTTTAGCTGCAAACCAGTCTCCTGCACCA
ACCTCGCCTTATCTTCCTCAGTAGGGTAAGGCCATTTGGAATGAGATTGCCACCATGCTTTGAGAACAGAAGTGGTGTCTCCTGGT
AGCTTCCCAGCTCTTCTCTTCCTCAGTATCTCCTCTCTTATGTCTACTATTTTCTCCTTGTAACCCTGTTTGAGCTCATGTTTGAG
TTCTTGTCTAACTCGCTCCATTAAAGATCTCTCGCTCTCAGTAGGAACCAGAGGACCAAACCCCAATACATCTAAGCCTCCTCCTC
CATCGAACATATTAGCATCGCTCTCTACTTGTTGTTCATCCTCATCATCTGACATTGTTGCTCCCATGCCTTCTCCTGGAGACACG
CCTGTTAAGCTTTGAAGAGACTGCTCGATCTCCCAGCAAGCCATCACAGCTTCCATTGCATGAACACGCACGTGTTGTTGCAGTTG
CTCTTTGAAAGAACACAGAAGCAAAACATAATGCGTCATGAACTGGTCAAGCTCTTTGTCGTCGTCGCCGACGAGTCCTTGGCCGG
CGCCTAAAGCAGAGTACTTCGCGACGACGTTCTGCGACTGAGCAAGCTGTGCGTCGATCCTCGGAAGCTGATCAACCGGCGTCGCG
ATTCTCAGACAGGCGACGTGCGCCGACAGAAGCTGCTCGTAGAGCGGATGGGAGAGTATCTCCGCCTTTTGCCTCGCATTCTGCCA
GCTCACAACTCCCTCCGCCGCCGCCGCAGCTCCTCCTCCTCCTCCTCCGTCGTTCTTGTTCTCGCCGCTGATCATCGTCTCTGCTC
CTTCTTCATCGACGACGACGTCTCCGACAACGGCGGCGCCGGCGTTGTTGTTGTTTCCGGTTCGTTGGAGGAAAGAGGAGGAACGG
GATAGCCACTGATTAGCTGCGGCGGCGGCGGCGGCGACGGCGGAGGAAGGAGAATCGGAGCTGCTTGCGGCGGTGGTGTTGGCGGT
GGATGTGTGGAGGTTGAGGAAGTTGTTGTTGTTGTTGTTGTCTGAGCGAAGAAGCGCCGTGTTGAGCCAATTAGGAGGTTGCGCGT
CGTGAAAATGTTGCTGCTGTTGCGGAGGCGGCGGAGGAGGTCCGTCTTGGTCGGTAAAATGATGAAAGAGAGGTCTTGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_197904 homeobox protein knotted-1-like 3 [Arabidopsis thaliana]18251e-201
AAM63298 KNAT3 homeodomain protein [Arabidopsis thaliana]18188e-201
BAJ34052 unnamed protein product [Thellungiella halophila]18161e-200
XP_002872145 hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp. lyrata]17972e-198
NP_001031938 homeobox protein knotted-1-like 3 [Arabidopsis thaliana]17676e-195

Swiss-Prot top hits (Blast detail)Scoree value
P48000 Homeobox protein knotted-1-like 318255e-203
O04136 Homeobox protein knotted-1-like 313882e-152
P48001 Homeobox protein knotted-1-like 413103e-143
Q0J6N4 Homeobox protein knotted-1-like 1312271e-133
O22300 Homeobox protein knotted-1-like LET1211973e-130

TrEMBL top hits (Blast detail)Scoree value
Q2V347 Putative uncharacterized protein At5g25220.217674e-195
B9IL21 Predicted protein14602e-159
B9RNZ6 Homeobox protein knotted-1, putative14172e-154
A6XHG4 Class II knotted-like homeobox protein13803e-150
B6VG75 KNAT3-like transcription factor13688e-149

Arabidopsis top hits (Blast detail)Scoree value
AT5G25220.1 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor18263e-204
AT5G25220.2 KNAT3 (KNOTTED1-LIKE HOMEOBOX GENE 3); transcription activator/ transcription factor17672e-197
AT5G11060.1 KNAT4 (KNOTTED1-LIKE HOMEOBOX GENE 4); transcription activator/ transcription factor13102e-144
AT4G32040.1 KNAT5 (KNOTTED1-LIKE HOMEOBOX GENE 5); transcription activator/ transcription factor10844e-118
AT1G62990.1 KNAT7 (KNOTTED-LIKE HOMEOBOX OF ARABIDOPSIS THALIANA 7); DNA binding / transcription activator/ transcription factor9706e-105

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  33%
 
92  33%
 
101  17%
 
211  17%

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