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Information for unigene UN18627
| FASTA Sequence |
| Unigene ID: UN18627 | Length: 1677 |
SSR | | GAAATAAATGTTGCCATTGCATCTTTTTGCCTTCCACTTATGGGTTCAGAATTTAAAACAGCTTTTGCCTACTTTCTTTTGCTTCC
AATGCCAAAGGAAACAAACAAAAAGAGGTTTTGATGACGAAGAAGAAGAAGAAACAACATAACTGTTAAGTAGATTTAAAAAGAAA
AAAAGGTATCATAATCAGTTCCCGTTGCATTGGCGAAGCACAACACCATTACTGCTACTTCCTTGCACTTGCTTCTTCTGGTTATG
TGGGTTAATCCGGTCAAGTCCCCATATCCTTATGGTGCCATCATCACTAGCTGAAGCCATCATGTGAAGGTTCGTTGGGCTCCAGC
CCACACAGTTAACCGCTCCTGCATGTCCTGGTAGCTCAATGATTAACTTCCCTGTCGATCTGTGCCATATGTATACCTGAAGATCC
TCGCTTCCACTAGCGATGAAACCTTGTTCATGGCCACCAAAGCACGATCTGATGAGGAACCGTGAACGCTTGTGGCCTTTGTATCT
CGTCACAATCTTGGGATCACTTTCGATACTCCATAGACGGATCTCCTGGTTCTGGAGATTCACCAGCACATACTTGTTGTCGTTGG
AAAGCGAGAACGAGGTAATGGTGTCTTCCTCTTCGATCAACCTCTCAAACGTCGCTTCCCTATCGAACAGAGATATCACGGAGTCC
TTGCACACACTCACAAGCCACTTTCCATCGTCGGTCATTGCTATATCCGATACCTTCTGCGTCCTCTGACCTTTCCAGCATTCCAT
CTCTCTACCGTCTAAATCCCACATGCAGATGCTTCGGTCTGTCATCCCTGCGATGATTCCCTTCCCATCAGCGTACCATCCGCAAG
AAATGGGACCGATACCGCCGCCTTTCTCATACGTGTGAGCACAGTCTCCTGAATCAACATCCCACCGTCTGATAACCTCTTCTGCT
CCACATGTAAGGACCTGACGATCATCAGGACTCCACAAGACCGCAGTTACTGGCTTCTGGTGGCCCACAAGTTTATGCTTCAGTGA
CATGTGCCCATCTGCTTTGATCTCCCATATAATTGCGGTTTGATCTTTGGAAGATGAGGCTAAATATTTGCCATTATGCGAGAATT
GCAAGAACCAGACTTCATCAGTATGCGACTCCAAGATCTGAACAGTCTGAGAAGGGATTTGGTGCTTCCCGCATTGATGGTCAGAA
TACAAAGACAAATCACTATCCAACGTATTATGGAAAACACAAGCATTCCGCTGAATGTGAAGTGAATTCTCAACTAAAGTCTCCAA
CCTATTCTCTGGGATTATAACAGAAGCAGGAAGCAAGCTCTGCAGTTCCTCGAGAACCTTCGACCTTGAACTCACATTCTCTTTGC
CTTGACCCGAGGCGGAAGGTGGTGATATAAGAGATGAAGCGAGCTCGTGAACACGCTTCGTATTAATACGAAGAGGCTCAATCTCG
TTCCTCAAGGTGCCTAGCGCTTCAGCTATCCTATCAAATCTCAAAAGCTCTAAGAACTTCTGCTCTAGTAGCAAGAAGGACGCGGA
TTTGACAGCCTTCTCATCCACCAGACCGATCCTGTGCAACGTGACGACACTCTCATCCCATTTACCCTCCTTGACCTGCTGAAGAA
ACGTCTCCACGAAGGAACGATGCAGAGGGATCCCTGATTCTTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873372 transducin family protein [Arabidopsis lyrata subsp. lyrata] | 2235 | 4e-249 |
| NP_196473 transducin/WD40 domain-containing protein [Arabidopsis thaliana] | 2219 | 3e-247 |
| XP_002513152 WD-repeat protein, putative [Ricinus communis] | 1761 | 3e-194 |
| XP_002270103 PREDICTED: hypothetical protein [Vitis vinifera] | 1708 | 5e-188 |
| CBI35349 unnamed protein product [Vitis vinifera] | 1708 | 5e-188 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q5SP67 WD repeat-containing protein 26 | 840 | 8e-089 |
| Q9H7D7 WD repeat-containing protein 26 | 809 | 3e-085 |
| Q8C6G8 WD repeat-containing protein 26 | 807 | 6e-085 |
| Q28D01 WD repeat-containing protein 26 | 803 | 2e-084 |
| Q9UT85 Uncharacterized WD repeat-containing protein C343.04c | 712 | 6e-074 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FNN2 WD-repeat protein-like | 2239 | 8e-250 |
| B9RGK0 WD-repeat protein, putative | 1761 | 2e-194 |
| B9H856 Predicted protein | 1668 | 1e-183 |
| B9GSR3 Predicted protein | 1640 | 2e-180 |
| A2X3P1 Putative uncharacterized protein | 1583 | 1e-173 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G08560.1 transducin family protein / WD-40 repeat family protein | 2240 | 3e-252 |
| AT5G08560.2 transducin family protein / WD-40 repeat family protein | 2240 | 3e-252 |
| AT5G43920.1 transducin family protein / WD-40 repeat family protein | 1049 | 4e-114 |
| AT4G02730.1 transducin family protein / WD-40 repeat family protein | 290 | 4e-026 |
| AT2G43770.1 transducin family protein / WD-40 repeat family protein | 258 | 2e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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