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Information for unigene UN18636
| FASTA Sequence |
| Unigene ID: UN18636 | Length: 708 |
| SNP | CATCGAAACGAAATCTCAAAATTGGGACGAAAATACTATAGAAGAGTAAACAAAATCAGTGCATTAAAATCTGAAACTTCAAGATA
AAAGGGTAACAACAGAGTTTAGGTCTATCAAGAAACATAAACTAGCATAACAAAACACTCTTTAAGCGCCAGTGAAAGCCTTCTTT
GCGAAAGCAGAAGCACCAGCTGGTATCACCTTCAACACATTGAACCTCACAGTCTTGGACAAAGGCCTGCATTGTCCAATGATGAC
ATGGTCTCCTTCCTTGACACGGAAGCAAGGTGAGACATGAGCAGGGATGTTCGAATGCCTCTTCTCATACCTCTGATACTTCTTGA
CAAAGTGAAGGTAGTTTCTTCGGACGATAATGGTCCTCTGCATTTTGGCCGAGTGGCAAGTACCAGCTAAGATACGACCTCTAATC
GAAACAGTTCCAGTGAAGGGACATTTACTGTCGATGTAGGTTCCTTGAATGGCATCACGAGGAGTCTTGAAGCCCAAGCCAATGTT
CTTCACGAATCTGTTTCCACCCTTTCCAGGTCTCTTTCCCTTTCCAGATATCTTCGAGCTGAGGAAGACCTTAGGTTGCTTTAGGA
AAGCTTTCTCAGTCTGTTCCGCCATGGCTGCTCTTCTGCTCCCGTGAAAGCTTTGAGGCAAAGGATGTAGGCAGCGACGGCTAGAG
AGCTCCACGAAAGAAAATCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_197763 40S ribosomal protein S11-3 [Arabidopsis thaliana] | 802 | 1e-083 |
| XP_002874145 ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata] | 799 | 3e-083 |
| AAA32866 ribosomal protein S11 (probable start codon at bp 67) [Arabidopsis thaliana] | 779 | 6e-081 |
| AAA32867 ribosomal protein S11 [Arabidopsis thaliana] | 776 | 1e-080 |
| XP_002880547 ribosomal protein S11-beta [Arabidopsis lyrata subsp. lyrata] | 775 | 2e-080 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42733 40S ribosomal protein S11-3 | 802 | 6e-085 |
| P16181 40S ribosomal protein S11-1 | 766 | 9e-081 |
| P25460 40S ribosomal protein S11 | 763 | 2e-080 |
| O65569 40S ribosomal protein S11-2 | 761 | 4e-080 |
| Q9M5M1 40S ribosomal protein S11 | 757 | 1e-079 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1H8R1 40S ribosomal protein S11 | 771 | 4e-080 |
| B9SKG4 40S ribosomal protein S11, putative | 765 | 2e-079 |
| B6T2A5 40S ribosomal protein S11 | 763 | 3e-079 |
| C5YFQ2 Putative uncharacterized protein Sb06g028330 | 763 | 3e-079 |
| B9T2N6 40S ribosomal protein S11, putative | 762 | 4e-079 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G23740.1 RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA); structural constituent of ribosome | 803 | 4e-086 |
| AT3G48930.1 EMB1080 (embryo defective 1080); structural constituent of ribosome | 766 | 9e-082 |
| AT4G30800.1 40S ribosomal protein S11 (RPS11B) | 761 | 3e-081 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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