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Information for unigene UN18638
| FASTA Sequence |
| Unigene ID: UN18638 | Length: 1245 |
SSR | | GGAATCCCCGTCACCACAGTCGGTGACTCAACGGTGACTTCTTCTCTAATCGCTAGACCTATTTCTAGGCTCCTCCTTTGTAGCTG
AGTTTGCAGTTAACAAATTTGAGCAGAAATGTCTCAAATCAATCTACCGTTTGAAGTTGGTCACACCATCGAAGCAAGATCTTTCG
AATTGGGTTTCCGTGGAGCATGGTTTCGATGCAAGATTACGAAGATATTCAACAAAGGGAGAGCTTTATTCTACGATTTGGAGTAT
CTTGATTTCACAGAAGAAGGAATACACACAACCAAAGTATTCCAGAAACGCCAAGTCGAGAACGAGAGTACCCTAATGGTTCGACC
CATACGTCCACCTCATGAAAGTGAAGTCCTTGACGAGGAAGAAGAAGAAGAAGTTGTTGTTGTTGTTAACGGTGTTTGGAAGGTGG
GAGACTTGGTGGATTGGTGGAAAGACGATTGCTATTGGTCTGGGACGGTTCAAGAAGTGAGAGAAGAAGATGAATCGGCTAAGATT
GAGTTGTTGCCTGAACCGTATGGAGAAGGAAAAAGCTACGATGCTGTGTTTAAGGATTTGCGTCCTTCGTTGGAATGGTCACTTGA
AGATGGATGGATTGTGCCTTTCTCTAAAGATGGGGAAAAGAGGCAGTGTGCTAAGCTAATGAAACTTCCAAATGAAGGAGCTGAAG
AAACTAGAGAAGAAGAGAAGCTGAGACCTACAAAGAAGTTAGTAGGAGATGAGGATCTAGCATTGAATATCATGGAATCAGAGTCT
ATAGAAGCCGCTGTGATGGACTTAGAAGAGATAGTTGTTCGAATAGAGTGGATTAAAGGAATGTTGTCGCTAAATTCAGAAAATTC
ATCCTGGATATATGAGGACTATCATCCATCCTCCTAAAAAAACAATGTGACAGGTAAGATAGATTTTTAACTTTTGCCATGATCAC
CATTTTTGATGGATTTTAAAGAAAGGCAGTCCTTAGGTGGAGGAGGAGTAGAGTAAAAGATGTAAATGTGGATCATACCTGACACG
TTTAGTGAAATTGAAAACGGAACATGACTCTGTTTTTTAGTTGTCTTTAATTTAAGTATTTTGGTTTCCCCTGTTTTTTTTTTGTT
TGTTGATATACTTCGCAGCTATTTCCTTGTATTTTACCTCGAACCTACTTTTGGTTGTCTGGGAATTAATCAAACGAAAGTTTTTT
AGATGGATCCTTGGATCCTCTGCAGACGAGTTTTTAAATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_199081 Agenet domain-containing protein [Arabidopsis thaliana] | 854 | 3e-089 |
| XP_002864152 agenet domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 646 | 4e-065 |
| NP_200020 Agenet domain-containing protein [Arabidopsis thaliana] | 644 | 7e-065 |
| XP_002865497 predicted protein [Arabidopsis lyrata subsp. lyrata] | 599 | 1e-059 |
| BAB11055 unnamed protein product [Arabidopsis thaliana] | 481 | 6e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q75JC9 Uncharacterized protein DDB_G0271670 | 129 | 2e-006 |
| Q17RH7 Putative protein TPRXL | 127 | 3e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FMZ7 Genomic DNA, chromosome 5, P1 clone:MJB21 | 854 | 2e-089 |
| Q8RXR3 Putative uncharacterized protein At5g52070 | 644 | 5e-065 |
| Q9FJ85 Genomic DNA, chromosome 5, P1 clone:MSG15 | 481 | 4e-046 |
| B9HKF5 Predicted protein (Fragment) | 445 | 6e-042 |
| B8A1W3 Putative uncharacterized protein | 355 | 2e-031 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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