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Information for unigene UN18641
| FASTA Sequence |
| Unigene ID: UN18641 | Length: 611 |
SSR | | GGGTCACAGAAACAGAGATTCCTCGCTGTCTGAACTGAAAAATAAGATCGCATTAACTCAAAGCGCTCACAAAGACAAAGATCTTC
TTCTTCTTCTTCTTCTTTCTCTTTTCTCTTTTCTCTTTCAGATAACGATGGAGAACCCTCCGGATCAAACAGAGTCAAAGGAGATG
ATGCTTCAACCCATAAGAAGAAGACGAAAGGGTGGTCTTCTCACTATGCCCTTCATCATTGCAAACGAGGGGTTTGAGAAAGTGGC
GAGCTACGGATTACTACAGAACATGATACTCTACCTGATGAGTGACTACGGTTTGGGAATTGTGAAAGGACAAACCGTGTTGTTCA
TGTGGGTCGCTGCTACTAACTTCATGCCTCTCGTTGGAGCTTTTCTATCAGATTCGTATTTGGGTCGCTTTCTCACCATCGCCATT
GCCTCTCTCTCCAGTTTCCTGGGGATGGTGCTACTATGGCTAACGGCGATGTTACCGCAAGTGAAGCCATCACCGTGTATAGCATC
AGCCGGAACCAACTGCAGTTCCCCGGCAGCGACATCTTCTCAACTGGCTCTTTTGTATTCCGCATTTGCACTTATATCGATCGGAC
CAGGTGGTA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_188239 major facilitator protein [Arabidopsis thaliana] | 709 | 6e-073 |
| AAM20441 putative transport protein [Arabidopsis thaliana] | 709 | 6e-073 |
| XP_002885127 proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] | 707 | 1e-072 |
| XP_002891678 proton-dependent oligopeptide transport family protein [Arabidopsis lyrata subsp. lyrata] | 573 | 3e-057 |
| NP_175630 putative peptide transporter [Arabidopsis thaliana] | 569 | 1e-056 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9M817 Probable peptide transporter At1g52190 | 569 | 5e-058 |
| Q9M390 Peptide transporter PTR1 | 207 | 5e-016 |
| Q05085 Nitrate/chlorate transporter | 194 | 1e-014 |
| Q9LFB8 Peptide transporter PTR5 | 164 | 4e-011 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8LPL2 Putative transport protein (Fragment) | 709 | 4e-073 |
| Q9LW69 Peptide/amino acid transporter-like protein | 490 | 1e-047 |
| B9RQI9 Nitrate transporter, putative | 462 | 2e-044 |
| Q2HU49 TGF-beta receptor, type I/II extracellular region | 438 | 1e-041 |
| B9H904 Predicted protein | 410 | 2e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G16180.1 proton-dependent oligopeptide transport (POT) family protein | 709 | 3e-075 |
| AT1G52190.1 proton-dependent oligopeptide transport (POT) family protein | 569 | 5e-059 |
| AT5G28470.1 transporter | 303 | 3e-028 |
| AT1G69860.1 proton-dependent oligopeptide transport (POT) family protein | 299 | 1e-027 |
| AT5G11570.1 proton-dependent oligopeptide transport (POT) family protein | 276 | 5e-025 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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