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Information for unigene UN18645
| FASTA Sequence |
| Unigene ID: UN18645 | Length: 1894 |
SSR | | GGATCGTTAGACTTACTTCCGCCGAGCCCTATCACACCACAAACTCAAAATCAACTTCCTCCTTTCACAACCCTTAAACCTTTTTC
TTCACAGCTCTGTTTCCTGTAAACTGATTATCGAATCCCCTCTTCTCCGGGAACAAAAAGCAGAGCTTTCTCCTTTCTTCCCGGAA
AATATAAAAAAAAACCCAAACTTTGCATTGCTCACAGGACTCTGAAATGCAATCACCGCATCGCATATTCTCTCGGCTTCTTCTGC
GTTCTCCAGTGAAGAAGGGTTACAGCAGGGGAACAAGTGTCGGCGGCGGCGGCGGCGGCTCACTTCACTTGTTGCTGCAACTCTAA
TCCGTTCAAGTCCGCAGCTAAGAGGGTTTTTTCTATCAAGTCGAGGGCTTGGCGTGAGATGTTCTGTCTCCCTCGATAGAGATACT
ACTACTACCATTACTGATTCCTTCTCTTCTCACCGGAATTTCTTCACTCGGGCTAAACAAGTGAAGAGGATTGAGATCAATGATCA
ACATAGTCAGAGAGCTGTCACTACTGCGCTGTGGTGCAATTTCCTTGTGTTCTCGCTCAAGTTTGGGGTTTGGTGGACGAGCTCTA
GCCATGTCATTATGGCTGAAGTTGTTCACTCTGTCGCTGATTTTGCTAACCAGGCACTTCTTGCTTATGGGCTCAGTAGCTCAAGG
CGTGCACCAGATGCACTTCATCCCTATGGCTACTCAAAGGAAAGATTTGTATGGTCTTTGATATCTGCTGTTGGAATCTTTTGCCT
TGGGTCTGGTGCTACCATTGTTAATGGAGTACAGAACTTGTGGACTTCTCAGCCACCTCCGAATATGGAATATGCTGCTTTGGTCA
TTGGTGGCTCTTTTCTAATTGAAGGTGCTTCGCTTCTCGTTGCAATTCAATCTGTCAAAAAAGGAGCTGCACAAGAAGGCATGACC
ATAAGAGATTATATCTGGCGTGGTCATGATCCTACTTCTGTTGCTGTTATGACTGAGGACGGCGCTGCAGTGACAGGTTTGGCAAT
TGCTGCGGCATCTCTTGTTGCTGTCAAAATGACAGGAAATCCTATTTATGATCCTATAGGATCTATTGTTGTTGGAAATTTACTTG
GAATGGTGGCTATATTCCTCATTCAACGGAACCGACATGCCTTGATTGGAAGAGCAATGGATGATCAAGACATGCGTAAAGTTCTT
CATTTTCTAAAGAACGACTCGGCTGTAGATGCTTTATATGATTGCAAAAGTGAAGTGATTGGCCCTGGATCCTTCAGATTCAAGGC
TGAAATAGATTTCAACGGGCAGGTCGTTGTCCAAAACTATCTGAAGAGAACTGGGCGTGAAGAGTGGGCGAAACAGTTTCGCGAGG
CTGCAAAGAGAGGGGATGATTCTGCAATGCTCAATGTTATGTCTAACTATGGTGAGGAGGTTGTAACGGCTTTAGGAAGCGAAGTA
GACCGGTTAGAGAAAGAGATCCAAGAGCTTGTCCCTGGAATCCAGTGCGTTGACATCGAAGCACACAATCCCATAGACCAATCTCT
ACTATGATCTGAAACTTTTCAGACAAGGTCTGAGTTATCGATACATTCCTCTTGGCCTCAAGAAATGGAAGCCACGACAGGTCTGG
CACTCTTGGAGAAATAGGAAAAGAGTGTTGTATCAGGTTTCTGCTTTGGAAATATGTGCTGATGAATTCTTCTCTGTCTGTTTTGA
TGTTAGAAACAAACTCTCATGAGTGTTGACTTTAAAAATTCTATGCACAACAAAATGCTTGTTGTAGTTCAGATCTCCATTGTATT
TTTAGAATTTGAATTTGAAGTGAAAAAACTGAAATGAGGTTGGAGGTGCTCTGATGAGTTGAAACGGCGTGTTAGAAAAGTTGGTG
TT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564594 metal tolerance protein C4 [Arabidopsis thaliana] | 1862 | 7e-206 |
| AAK92793 unknown protein [Arabidopsis thaliana] | 1855 | 5e-205 |
| XP_002891647 hypothetical protein ARALYDRAFT_892136 [Arabidopsis lyrata subsp. lyrata] | 1849 | 2e-204 |
| XP_002315378 metal tolerance protein [Populus trichocarpa] | 1630 | 6e-179 |
| XP_002262765 PREDICTED: hypothetical protein [Vitis vinifera] | 1625 | 2e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8H1G3 Metal tolerance protein C4 | 1862 | 3e-207 |
| Q5PQZ3 Zinc transporter 9 | 688 | 4e-071 |
| Q6PML9 Zinc transporter 9 | 653 | 5e-067 |
| Q5R4H0 Zinc transporter 9 | 653 | 5e-067 |
| Q6DCE3 Zinc transporter 9 | 651 | 8e-067 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9HV32 Metal tolerance protein (Fragment) | 1630 | 4e-179 |
| C6TAH5 Putative uncharacterized protein | 1608 | 1e-176 |
| B9FEB5 Putative uncharacterized protein | 1503 | 2e-164 |
| B8AS09 Putative uncharacterized protein | 1501 | 4e-164 |
| B9RKV4 Metal tolerance protein C4, putative | 1234 | 3e-133 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G51610.1 cation efflux family protein / metal tolerance protein, putative (MTPc4) | 1862 | 3e-208 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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