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Information for unigene UN18646

FASTA Sequence
Unigene ID: UN18646Length: 2192  SNP
GGGGATCACAATCGGAATCTCCACCGTGGTTGTTGCGAAACGATCAAAAGGATGTTTGACGGTATCTTAGGCCGCGGATTCGCTCC
CAAGGGGAAACCACTGATAAAACTGACTAAGAATCGGATCGATGTTCTTCGGAGGAAGAGGACTGCGACGATCAAGTTTCTCAAGG
GAGATTTCGCTGATCTTATCTCTAATGGCCGCGACGTCAATGCTTATACCAGGGCGGGAGGCCTTCTTGATGAACTAAGGCATCTC
TGGAATCTTGATTTTGTTGAGAGCACTTGTGATTTCGTGTATAAGCAACTCTCTACCATGCAGAAGATGGAGGAATGTCCAGAAGA
TTGTCGTGAAGCTGTGTCGTCCTTAATGTTTGCAGCCTCTGGATTTTCTGAATTGCCTGAGTTGCGTGAACTGAGGCAGATGTTTC
ACGAAAAATATGGAGATTCACTTAGTGTGTTTGTCAACCAAGAGCTTGTTGAGAATATGACCTCAAAGCCATTCTCGTTGGAGAAG
AAAGTGAAGTTAATGGAAGATGTTGCATCGGAGTTCGCTATTCGTTGGGATTCTAAAGCTTTTGAGAAGAGGATCATGAGACATAA
TGGTAGCTCAGCAAAGGAGACACCAAAAAGTACTTACGACAAGCACAAGCCTGTAGACGTAAACATGGCCTTGCCACCAGAAAGGA
AAAAGGATGTTGCATCAGAAAGAAGAGATCCTTTGTTTCGACCAGATAATTATCATAACGGTGTCAGAGAACATCAGCATGGGGTA
ACATCTAAAGATAAGCCAGATGATGTTCGTCACGCCTCCAGATCGGGAAGCAAGGATGATAAGGCGGAAAGAAATGAGTTCCATTT
GCAACCTAAACAGCAACCTTCCAGAGGAAGACCTCAACCTATTTTTAACGAAGGTGACACTATAGTGATGAAGATCAAACGTGAGA
ATCTCGTTCAAGGGATTGGACATCAAAACGGTGAAGCTGCTGCTGCGCCTAAGAAAAAAGAGGTGTCAGAGAAACCCAAGCGTAGC
AGCACCAAAACAGAGGACAAGCTAGTTCTTGGCTTTAAGCAAGAAAGTTTCTTCAAAGGATACAAACATGAGAATGGCGAAGAGCA
TGCGCCTCAGAAAGTGGAAGATAACCTCTCAATGCCTCCAAAGCCAAGGTCGAAAAGAACAGTACCTATAGATTCAGTCCGTAGAC
ATCGCAGCGATCAAGATAGTAGAGAAAATGCAGTTCCTGTGGGAGAAGGCACAGGAAATGGTTCATCTGGTTGTAACATCAAGGTT
GGTGGAGATGAACATGATCCAGCAAGTAAGTTTGAGGAGCGAGAAACAGAGAGAATGATGAAGTCACCCTTGTACAAATCCCTTCC
CCCACCTCCGTATGTTAAACCGAGTGGTAAAGCAAAGATTGAAAAACCTGAAGCTTCAAGTAATCCAAAGGCTCGGTTCGATGGTG
AAGAAGGAAATATTCCAGACGTTGATAAAAAGGTTTCTGAAGCGGGTCAGCTTAAAGTGAATGACATAGATGATCAATCTCTGAAG
CGGCGATCTAGTAGAAGAAAACACAGTATACAATCGGGTGATGGTGATGATGATACAAGAAGCAGCAGAAGAAGGGAGCACTCAAG
GAAAGGCCTTCAAGTCTTAATAGATGAAGATGAGAATGACAGTGAGGAAAAGATGATGGATAAACTTCTGATGCATTACAGTAAAA
AGCCTTCGAGTTATGAAAAGATCAAAGAAGAATCTAAAAGCAGACGTTCACATCATAGAAAAGACGAAGGTGAAGAGATTCATCAT
CCCGCTCGGTCACTTAGTCTCCCCAGTGAGCAATTTGCCGGACCATCTGAACCCGCAAAGACGTTTGCTCGTGCCTCCTCGTTTCA
GCCAGAACGTAGTGAAGCTAAGCACGTTCACCCCAAGTTACCTGACTATGAGGATTTGGCTGCTAGATTTGCAGAGCTAAAAGGAA
GGTAATATGTTTTGAACAGTTTGTGCCTTAGAGAAATATAGTGCGTCTGTACGAGATTAAAGATTCTATTACCCATTACTCACATC
TTCCTATTACTTCCCCATTGTTGGTTTGACACATTGTTATGGACCCCCAAAGAGCTATTGATCATCTGTTTCCGTATGGGTTTCAT
TTAACATTTTATTAACAAAATTGAAAGGATGTGTTTTTGATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869281 hypothetical protein ARALYDRAFT_913214 [Arabidopsis lyrata subsp. lyrata]9424e-099
NP_194961 regulator of Vps4 activity protein [Arabidopsis thaliana]9164e-096
CAA16956 putative protein [Arabidopsis thaliana]8441e-087
XP_002514318 conserved hypothetical protein [Ricinus communis]6136e-061
XP_002281071 PREDICTED: hypothetical protein [Vitis vinifera]5992e-059

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
O49357 Putative uncharacterized protein AT4g3235012192e-131
Q8RXT2 Putative uncharacterized protein At4g3235012192e-131
B9RKS4 Putative uncharacterized protein6134e-061
B9ILL8 Predicted protein (Fragment)5175e-050
Q8L402 Putative uncharacterized protein At1g799104656e-044

Arabidopsis top hits (Blast detail)Scoree value
AT4G32350.1 unknown protein12209e-134
AT1G79910.1 unknown protein4653e-046
AT1G52315.1 unknown protein3533e-033
AT1G79910.2 unknown protein3183e-029
AT1G13340.1 unknown protein1822e-013

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
105  45%
 
121  9%
 
82  18%
 
111  9%
 
92  18%

Unigene MembersMember information