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Information for unigene UN18648
| FASTA Sequence |
| Unigene ID: UN18648 | Length: 879 |
SSR | | GGGATCAATCAATCGAGCACGGAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAATGGGAAAAGAGATGGAGTCCCCGAAGGAGCA
GAGCTCTTACACCGTTGAGCAGCTCGTCGCCGTCAATCCCTTCAACCCTGAAATCTTACCTGATCTCGAAAACTACGTCAACGAGC
AGGTTACATCGCAAACGTATAGCCTGGATGCAAATCTATGCTTGCTTCGTCTCTATCAGTTTGAGCCTGAGCGCATGAATGCTCAT
ATCGTGGCTCAAATCTTGGTCAAGGCTCTTATGGCTATGCCAGCTCCAGACTTCAGCCTCTGCCTCTTCTTGATTCCCGAAAGAGT
GCAAATGGAGGAGCAGTTCAAGTCACTCATTGTGCTCTCACACTACCTTGAGACTGGTAGGTTCCAACAGTTCTGGGATGAAGCTG
CCAAGAACCGTCACATTCTTGAGTCTGTTCCAGGTTTTGAACAAGCTATCCAAGCGTATGCAAGTCACCTTCTTAGCTTAAGCTAC
CAAAAAGTTCCAAGATCTGTGCTTGCCGAGGCTGTTAACATGGATGGTGCATCTCTAGACAAGTTCATTGAGCACCAAGTGACTAA
CAGCGGATGGATTGTAGAGAAAGAAGAAGGAAGTATCGTCTTACCACAGAATGAATTTAACCATCCAGAGCTTAAGAAAAATAATA
CAGGTGAGAATGTTCCCTTGGAACACGTCGCCCGCATCTTCCCCATCCTTGGTTAAACCAGTTTGTCAGTACTCTTGAAATTTTCC
TTTTTGTCTCCCTGGCTTTTAAACTAATGCAACACTTTTAAGACACACTGTAATGTGATTTTTGCATCAACCATTATAAGTAGTTG
CTCGATTTGACTGCACTGC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002867191 hypothetical protein ARALYDRAFT_913095 [Arabidopsis lyrata subsp. lyrata] | 1099 | 7e-118 |
| NP_195051 translation initiation factor 3 subunit K [Arabidopsis thaliana] | 1063 | 1e-113 |
| XP_002326147 predicted protein [Populus trichocarpa] | 974 | 2e-103 |
| ABK93965 unknown [Populus trichocarpa] | 957 | 2e-101 |
| XP_002516208 Eukaryotic translation initiation factor 3 subunit, putative [Ricinus communis] | 955 | 4e-101 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SZA3 Eukaryotic translation initiation factor 3 subunit K | 1063 | 5e-115 |
| Q94HF1 Eukaryotic translation initiation factor 3 subunit K | 869 | 2e-092 |
| Q567V6 Eukaryotic translation initiation factor 3 subunit K | 324 | 2e-029 |
| Q3T0V3 Eukaryotic translation initiation factor 3 subunit K | 314 | 3e-028 |
| Q9DBZ5 Eukaryotic translation initiation factor 3 subunit K | 314 | 3e-028 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9PHP7 Predicted protein | 974 | 2e-103 |
| A9PC62 Putative uncharacterized protein | 957 | 1e-101 |
| B9RR39 Eukaryotic translation initiation factor 3 subunit, putative | 955 | 2e-101 |
| B9INC2 Predicted protein | 941 | 1e-099 |
| B7FF79 Putative uncharacterized protein | 887 | 2e-093 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G33250.1 EIF3K (EUKARYOTIC TRANSLATION INITIATION FACTOR 3K); translation initiation factor | 1079 | 6e-118 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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