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Information for unigene UN18660
| FASTA Sequence |
| Unigene ID: UN18660 | Length: 1769 |
| SNP | GCGTTGAGTGTAGCTGCTGGATTGCTTGGAGCTTGCTTGCCTGGAACTGGGGCTAGAATCGTAGCTTTGGTCGGAGGTCCATGTAC
AGAGGGTCCTGGAACGATTATCTCAAAGGATTTATCAGAGCCTGTGCGCTCCCACAAAGATTTGGATAAAGATGCTGCTCCTTATT
ATAAAAAAGCTGTCAAGTTTTATGATAGTATTGCAAAGCAGCTGGTCGCTCAGGGTCATGTGTTAGACCTTTTCGCTTCTGCTCTT
GATCAGGTTGGGGTTGCTGAAATGAAAGTTGCAGTTGAAAGTACCGGTGGGCTTGTTGTTCTGTCCGAAAGTTTTGGGCATTCCGT
ATTTAAAGATTCCTTCAAGCGGGTGTTTGAAGATGGCGAGCAGTCTCTTGGCCTCTGCTTTAATGGCTCGCTTGAGATCAATTGCT
CAAAAGACATCAAAATTCAAGGTGTTATCGGGCCTTGCTCATCATTAGAAAAGAAAGGTCCAAGTGTTGCCGACACAGTAATTGGG
GAGGGGAATACAAATGCTTGGAAGTTATGTGGCCTCGACAAGAGCACTTGCTTGACTGTATTCTTTGATCTATCCTCAACTGGTTC
AAATGCTCCTGGAACTGCAAATCCTCAGTTTTATTTGCAGTTTGTTACAAGTTACCAAAACCCTGAAGGTCAAACATTGATCCGGG
TTACAACAATAACCAGACAGTGGGTAGATACTGCTGTGAGCACAGAGGAACTTGTGCAAGGATTTGATCAAGAAACTGCTGCTGTG
GTCATGGCAAGATTAGCTTCCTTAAAAATGGAAACGGAGGAGGGATTTGATGCTACTCGATGGCTAGATCGGACTCTCATTCGTCT
GTGTTCAAAATTCGGTGACTATAGAAAGGATGACCCATCCTCATTTACGCTGAATCCATATTTTTCATTGTTCCCTCAATTCATAT
TTAATCTGCGGAGGTCACAGTTTGTTCAGGTCTTTAACAATAGTCCAGATGAAACTGCATATTTCCGCATGCTGCTAAACCGGGAG
AATATATCAAATGCAACTGTCATGATCCAGCCATCGCTGACATCATATACATTCAGTTCACCACCTCAGCCAGCTTTGCTTGATGT
GGCTTCCATTGCAGCCGACAGAATTCTTCTGTTAGATGCATATTTTAGTGTTGTTGTCTTCCATGGCATGACAATAGCACAATGGC
GAAACATGGGTTATCATCATCAAGCTGAACATGAGGCATTTGCTCAGCTACTGCAAGCTCCTCAAGAGGATTCCCAGATGATAGTC
CGGGAGCGTTTCCCAGTCCCGAGATTAGTTGTGTGTGATCAACATGGATCACAGGCAAGGTTTTTATTGGCAAAGCTGAATCCATC
GGCCACTTACAACAATGCAAACGAGATGTCAGCAGGATCAGATGTAATCTTCACTGACGACGTGAGCCTGCAAGTCTTTTTTGAGC
ATCTTCAGAAACTGGCCGTGCAATCCTGATGGAAGTAGTCACAGTCGGTCCCAGTTTTTCTTTGGTCGCTTAAATTATATGGTCTT
CCATACTATTGTACCCAATTTAGAGTTTTTTTTTGTTTTTTTTCTTTTGTGATATCAGCTCGTTTACTTTGCTGTCTCGTTGCCAT
CTTGGTCTCACATAAAAACATCTTGGAACACAAAAGTTGTTTGCATTGGATTTGTCTGAAGGAAAAAGAACTGCTGTTTAATACTC
TATGATGTTTTAGTAGAAATACAAATTAAGAAAAAAAACTTTTTTGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870333 hypothetical protein ARALYDRAFT_493493 [Arabidopsis lyrata subsp. lyrata] | 2444 | 2e-273 |
| NP_189008 protein transport protein SEC23 [Arabidopsis thaliana] | 2393 | 2e-267 |
| XP_002885585 hypothetical protein ARALYDRAFT_479878 [Arabidopsis lyrata subsp. lyrata] | 2391 | 3e-267 |
| NP_193152 sec23/sec24-like transport protein [Arabidopsis thaliana] | 2384 | 2e-266 |
| CAB10195 transport protein [Arabidopsis thaliana] | 2384 | 2e-266 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q15436 Protein transport protein Sec23A | 1345 | 2e-147 |
| Q5R9P3 Protein transport protein Sec23A | 1345 | 2e-147 |
| Q01405 Protein transport protein Sec23A | 1335 | 4e-146 |
| Q7SZE5 Protein transport protein Sec23A | 1331 | 1e-145 |
| Q05AS9 Protein transport protein Sec23A | 1330 | 1e-145 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LUG1 Protein transport protein Sec23 | 2393 | 1e-267 |
| O23275 Transport protein | 2384 | 1e-266 |
| Q8VXX0 Putative transport protein | 2384 | 1e-266 |
| Q8RW92 AT4g14160/dl3120w | 2377 | 9e-266 |
| Q3EA37 Putative uncharacterized protein At4g14160.1 | 2372 | 3e-265 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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