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Information for unigene UN18669

FASTA Sequence
Unigene ID: UN18669Length: 1468 SSR 
CTTACATTTCATTTGTATAATGTCTAACGTGCGTCCATGGTTCCGTCTCGCTAGCATCGCTAGACCTACATCACAAGGCTCAAGCG
ACCCACCTCCTCCTCCACCTCAACCTCGACAAACCCCTAGCCGTCAGGTTGTAGTCAGACAACAGCCGAAACAACCGTCACCTACA
CAGCAGCAACAACCTCCTTCGCCTCCACGTCAGCAACGACCTCCTTCGCCTCTACGCCAGCAACGACCTCCTTCGCCTCCACGCCA
GCAACGACCTCCTTCGCCTCCACGTCAGCTTCCTTCCCCACCACGTCAGCAAACTCCTCCACCTCCTCAAGAGCGGTCTCCATATC
ATTCACCGCCGAGCCGCTACATGTCACCACCGACCCCACCAAAAGCTAAGTCTCCGTCGCCCCCACCGCCACCACCTCGGTCGTCA
TACACGCCGCCACCATCTCCCAAGGAGGTTCAAGAAGCTTTCCCACCGCGAAAACCAACTTCACCGCCGAGTCCAGCCCATTCAAC
TAGGTCAACAAAATCTGAACCAGAGAGTTTTCGAAAAGCACCATCACCGAGAACACTCTCTCCTTACTCTCTCCCACCTCCTCAGT
TACATTTCGAACGTGAAACCACTCAGAAAAACATTCTCACGGCCGAGAAAACAAGCCAACTCCAAGAACCAAATCATCATAACCAG
AGCCATAACCATAATAATCAAGGCAACAACACCAAGAGGACTCATCGTCAACAACCTTTTTCTGGTTCCGAAAACATAATGGGCAC
ACGAGCCATCACCATTGCAGGTGAAAACAAAGGTGCTGTAATGGAGATTCTACGCTCACCATCAGGCAACAGAACCGGAGGAGCAG
GACCACATCCCTCTGTGGGGTTTAGCGGCACTGGAGAGAAAGGACGGCGACTTCAAAGCAGTAGTAGCAGCAGCAGCAGCAGTGAT
GAAGGAGAAGGGAAGAAGAAAACCACCAAGAACCCTAATAATAATGCCAATAATAGTCATCATCTTCCGATGAAAGCATTTATGAA
CAGTAACGTTCAGATGATAAACAACTCTCTTGTTTACAACTCGATGGCGACTCATCATGATCCTGGTGTTCATCTTAAAATCTCTC
GGAAACCTGGCTCTGGCAATGGTTTCCACGTCAAGGATTACGGTAATAATGACGGCGGATACACCAACTGAAAAAGTAACATTTAT
TCCGAAAAGGAAAAGAAAACCAAAAACAAAGTTAAGGGTTTTGGGTTCTATTTACAATAAATTCAATTTGTTAAGAAAAAAGAAAA
AAGAGAGGAAAAAAAGGAATAAGAACAAAAAACGAGTGGGGTTAGTGGTTTATGATTATTCTCTAATCTTTTTATGACCTTCTCAC
TCACATGGAGTCTTGATCCGTTTATTGCAACGGAATTTTTATATAATTTGTAACGTCCTTTTGTCAAACAATAATCATGAAATCGT
TTCACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880255 hypothetical protein ARALYDRAFT_904132 [Arabidopsis lyrata subsp. lyrata]14801e-161
NP_182186 uncharacterized protein [Arabidopsis thaliana]14092e-153
CAB62280 hydroxyproline-rich glycoprotein DZ-HRGP [Volvox carteri f. nagariensis]3293e-028
ABA41400 pherophorin-C2 protein precursor [Chlamydomonas reinhardtii]3267e-028
XP_002945771 pathogenesis-related protein 1-like protein [Volvox carteri f. nagariensis]3123e-026

Swiss-Prot top hits (Blast detail)Scoree value
Q52KI8 Serine/arginine repetitive matrix protein 12871e-024
Q9FPQ6 Vegetative cell wall protein gp12852e-024
P13983 Extensin2824e-024
Q9XIL9 Pollen-specific leucine-rich repeat extensin-like protein 32601e-021
Q03211 Pistil-specific extensin-like protein2403e-019

TrEMBL top hits (Blast detail)Scoree value
Q9ZNU3 Putative extensin14091e-153
Q9SBM1 Hydroxyproline-rich glycoprotein DZ-HRGP3292e-028
Q3HTK5 Pherophorin-C2 protein3265e-028
Q3HTK6 Pherophorin-C1 protein3131e-026
Q8L685 Pherophorin-dz1 protein3032e-025

Arabidopsis top hits (Blast detail)Scoree value
AT2G46630.1 unknown protein14161e-156
AT1G44191.1 Encodes a ECA1 gametogenesis related family protein3121e-028
AT1G49490.1 leucine-rich repeat family protein / extensin family protein2653e-023
AT2G15880.1 leucine-rich repeat family protein / extensin family protein2601e-022
AT3G19430.1 late embryogenesis abundant protein-related / LEA protein-related2511e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
181  11%
 
112  22%
 
102  22%
 
62  22%
 
122  22%

Unigene MembersMember information